Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2004 ATGATGGATACATTGTTTAGGCTAGTCAATTTTCAACATCATCCTCAACAACCTGATCAATCCCTCAACTCCACCACCAGCGTCACTTCTAGCGGCTCCAAATCTTCCACACCCCAAAACTTCTACCCCACCCCACAACAACAACAACACCACCAAGAATGCTTCAACCTTTTCATGGATAATGAAGAAGACTTGTCCTCGTCTTCTTCCAAGCACTACTATAATCCCTCTCACCCCCATCACCACCCTCCTTCCTCCACCACCAGCCCCACTACCACCGCTGATTTCTCCTTCTCCCCCACCACCGCTGACTTCAACTTGGAACTCTCCGGCAACGGCAAGTGGGCCTCCGATCTCCTCCTCGAAACAGCTCGCGCCATCGCCGACAAAAACAGCCCTCGTATCCAACAACTCATGTGGATGCTCAATGAACTCGCTTCCCCCTATGGTGACACTCATGAAAAACTCGCCTTTTACTTCCTCCAGGCCTTGTTCGCTCGCATGACTGACTCTGGCCTCCGTACGTACCGTACCTTAACCACCGCGTCTGATAAAAACTGCTCTTTCGAATCAACCAGAAAAACCGTCTTGAAGTTCCAAGAGGCAAGCCCTTGGACTACCTTCGGTCACGTCGCTTCCAATGGAGCCATATTAGAAGCCCTCGAAGCAGAGCCTAAATTACACATACTCGATTTCAGCAACACATATTGCACCCAATGGCCTACCCTTTTGGAATCCCTGGCCACTCGCACTGATGACGCCCCTCACCTCCGTTTAACCACCGTCGTCACCACCCGATCCGGCGCTTCCGACGCGGCGGTTCAAAAAGTCATGAAGGAAATAGGTGCTAGGATGGAGAAATTCGCGCGTCTCATGGGTGTGCCATTCAAATTCAATGTCATCCATCATAACGGTGATCTTTCAGAGTTGAAATTTGCGGAATTAGATATTAAAGATGACGAGGCTTTAGCTATAAACTGTGTGAACACTTTGCATTCTGTCTCGGTCGTTGGTAATAACGGTAATAATCATCGTGGCGCGTTGATATCGTCGTTCCGGAGGTTACAACCTAGGATAGTTACGATAGTGGAAGAAGAGGCTGATCTTGATGTTGGGTATGATGGTTTTGAATTTGTGAATGGAGTTGAAGAATCCTTGAGGTGGTTTAGGGTTTATTTTGAGGCGTTAGAGGAGAGTTTTCCGAAGACGAGTAACGAAAGGCTTATTCTTGAGAGGGAGGCCGGACGATCGGTGGTTGACTTGGTGGCGTGTGATCCGTCGGAGTCGGTGGAGAGGCGGGAGAGGGCGGGACGGTGGTCGCAGCGTATGCATGGGGTTGGGTTCAATGCGGCGTCGTTTAGTGATGAGGTATGTGATGATGTGAGGGCGCTGCTGAGAAGGTACAGGGAGGGGTGGTCAATGACACAGTGTTCCTCCCACGCCGGAATATTCTTATCGTGGAAGGAGCAGCCGGTGGTGTGGGCCAGTGCCTGGAGGCCTTGA 1503 0.5057 MMDTLFRLVNFQHHPQQPDQSLNSTTSVTSSGSKSSTPQNFYPTPQQQQHHQECFNLFMDNEEDLSSSSSKHYYNPSHPHHHPPSSTTSPTTTADFSFSPTTADFNLELSGNGKWASDLLLETARAIADKNSPRIQQLMWMLNELASPYGDTHEKLAFYFLQALFARMTDSGLRTYRTLTTASDKNCSFESTRKTVLKFQEASPWTTFGHVASNGAILEALEAEPKLHILDFSNTYCTQWPTLLESLATRTDDAPHLRLTTVVTTRSGASDAAVQKVMKEIGARMEKFARLMGVPFKFNVIHHNGDLSELKFAELDIKDDEALAINCVNTLHSVSVVGNNGNNHRGALISSFRRLQPRIVTIVEEEADLDVGYDGFEFVNGVEESLRWFRVYFEALEESFPKTSNERLILEREAGRSVVDLVACDPSESVERRERAGRWSQRMHGVGFNAASFSDEVCDDVRALLRRYREGWSMTQCSSHAGIFLSWKEQPVVWASAWRP 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2004 500 MobiDBLite consensus disorder prediction 9 50 - -
Alju09g2004 500 MobiDBLite consensus disorder prediction 66 95 - -
Alju09g2004 500 MobiDBLite consensus disorder prediction 10 50 - -
Alju09g2004 500 Pfam GRAS domain family 118 499 IPR005202 -
Alju09g2004 500 ProSiteProfiles GRAS family profile. 107 499 IPR005202 -
Alju09g2004 500 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 92 489 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2004 Alju-ChrAlju09 43836242 43837744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2004 2 500 GRAS Transcription Factor Family AT4G37650 57.038 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju09g2004 GRAS 4.8e-105 CL0063