Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1949 ATGTGTAAGGCTCCGTTGGTTCACGGGTCGCTGTCGGTTGAGGCAATGGAGATGGCCGAGTTAAGGACTTTGGAACAGCTCTATGACGGCAGTGATGTACAGTCATTGCTAACTCAAGGAGAGTATATTGAGTGCTTAAATGAACAAGAGGGGTCAACACCCGCAAGAGTAGCCATATTTGGGTTTAGTGGCCAGATTGATGGTGTTTACAGTTATACATTTAGGAAAGATCATCCTCATTTGAATACTGAAGATTCAGCGATTGAAACAGAACTTCATTTGTACTTCAAGAGGCATTTCCAAAAGTGTGCTGCTGTTATTGTAAACAGCACTATGAAAGGGCGATCTCAGGCTGTGGACATCAAGGAGTCATCAAACTTAATGGAGAAAGAGGTTAGAGTTTGCGATATCTGTGGGGATGTGGGTCTGGAGGAGAAACTTGCAATTTGCGGCAAGTGTACTGATGGGGCAGAACACATTTACTGTATGCGCATTATGCTGGACAAAGTTCCTGAAGGCGGTTGGACTTGTGAAAAGTGCAATTTCAGGACAGACGCTAAGAAACCAGAACAAGATAAAGTCAAAGAGACAGCTGGAAAATCGATAGGGCATCCACAATGCCAAGGATTTGGAAGTTCTGTAAGTATTGAATCTAGGAGTGGTTCAAAAATCAAAATTAGATCTTCGTGTTCAGGTGGAAAGGGAACAAGTGATGTGACATCTCTGTTACCAGCAAAGAGGCATGGTGCCCTTTCACAAGCGCAGTCTGTAGAAAAAACAAAGACCATCAGAGTGAGGGTTGTGCCCCCAAGGTCACCCAATATGAACAAGTCTTTGCTTCAAAGGGACACCTTCTTCTACTTGAAAAAGGGACAGATGAAAGCATACAAACAAACTCACTCTAAGCCTTAA 912 0.4342 MCKAPLVHGSLSVEAMEMAELRTLEQLYDGSDVQSLLTQGEYIECLNEQEGSTPARVAIFGFSGQIDGVYSYTFRKDHPHLNTEDSAIETELHLYFKRHFQKCAAVIVNSTMKGRSQAVDIKESSNLMEKEVRVCDICGDVGLEEKLAICGKCTDGAEHIYCMRIMLDKVPEGGWTCEKCNFRTDAKKPEQDKVKETAGKSIGHPQCQGFGSSVSIESRSGSKIKIRSSCSGGKGTSDVTSLLPAKRHGALSQAQSVEKTKTIRVRVVPPRSPNMNKSLLQRDTFFYLKKGQMKAYKQTHSKP 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1949 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 197 IPR013083 -
Alju09g1949 303 MobiDBLite consensus disorder prediction 188 220 - -
Alju09g1949 303 MobiDBLite consensus disorder prediction 206 220 - -
Alju09g1949 303 PANTHER - 132 278 - -
Alju09g1949 303 SUPERFAMILY FYVE/PHD zinc finger 125 187 IPR011011 -
Alju09g1949 303 SMART PHD_3 134 181 IPR001965 -
Alju09g1949 303 Pfam PHD-finger 134 182 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1949 Alju-ChrAlju09 43319102 43324469 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Alju09g1949 PHD 2e-07 CL0390