Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1945 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGCTTTGTTCCAAATCTTCACAGACCCGACTTGCACCTTCAGCACCAACCCGATTCCGAAGAAGATGCCAGTCGGGCCGCCCCGTTTTCTTCCGAAGATGGTCCCCACCAAGGCCTCGAGCTCGCCTCCGCCTCCACGGGTTCCGGCGACATCGTCGCCCGCCGCCCCCGCGGCCGTCCTCCCGGTTCAAAAAACAAGCTCAAGCCACCCGTTATCATCACCAGAGAAAGCGCCAACACGCTCCGGGCCCATATTCTAGAAGTGGCCAGTGGCTCCGATGTGTTTGACTCCGTCGCCACCTACGCGCGTCGCCGCCAGCGCGGGATCTGTATCCTGAGCGGCAGTGGCACCGTCACCAATGTGACGTTGCGGCAGCAGGCTGCCGCGGGAGCCGTGGTCACACTTCATGGAAGGTTCGAGATATTGTCGTTGTCCGGGTCGTTCCTGCCGCCGCCTGCCCCGCCAGGCGCGACGAGCCTGACGGTTTTCTTGGCGGGAGGGCAAGGACAAGTTGTGGGAGGATGTGTAGTGGGAGAGTTGACTGCAGCGGGACCCGTCATGGTAATCGCTTCTTCGTTTACAAACGTGGCGTACGAAAGGTTGCCGCTGGATGAGCAGGAGGAGCAACTCCAGATGCAACCGCCCGCCGTGGCTTCTTCTCAAGGTTCGGCTGCGGCGGCGGCCGCGGCTTTCCCGGACCCATCCTCCGGTCTACCGTTCTTCAATTTGCCCCTTAATATGCAGATTCCAGTGGAAGGCTGGGTCGGCAACTCAGCCCCTCGTCCTCCATTTTGA 825 0.6097 MAGLDLGTASRFVPNLHRPDLHLQHQPDSEEDASRAAPFSSEDGPHQGLELASASTGSGDIVARRPRGRPPGSKNKLKPPVIITRESANTLRAHILEVASGSDVFDSVATYARRRQRGICILSGSGTVTNVTLRQQAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLAGGQGQVVGGCVVGELTAAGPVMVIASSFTNVAYERLPLDEQEEQLQMQPPAVASSQGSAAAAAAAFPDPSSGLPFFNLPLNMQIPVEGWVGNSAPRPPF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1945 274 FunFam AT-hook motif nuclear-localized protein 91 219 - -
Alju09g1945 274 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 220 - -
Alju09g1945 274 MobiDBLite consensus disorder prediction 21 37 - -
Alju09g1945 274 MobiDBLite consensus disorder prediction 1 80 - -
Alju09g1945 274 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 205 IPR005175 -
Alju09g1945 274 Gene3D - 91 224 - -
Alju09g1945 274 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 228 IPR014476 GO:0003680
Alju09g1945 274 CDD DUF296 92 175 IPR005175 -
Alju09g1945 274 ProSiteProfiles PPC domain profile profile. 88 225 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1945 Alju-ChrAlju09 43239037 43239861 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1945 1 274 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.878 1.74e-99 291