Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1939 ATGGCGAAGCTTAAAAACAGAGACAGAGAAAGAAGTAGGACCCCGGATTCCTTTGACAGAGTTGATCTTGATATTCTACCAACAGAAATGGCAGTGAATCAGAATTGTGAAAATGGGAGAAAGAGTTGTATATTTCTGGGTGTAGAGTTTGAAAAAGAAAGACAACATTTTTTAGCCTTTTATATAATGCCAGTTCCACTTGCTCCTTATCCGACGCCCCCAGCTCCATATTCTCCTCCAGCAAATGGTGCACAGAGCCAACTTGTGTGTTCTGGGTGTAGAAATCTTCTAATGTATCCAGTTGGAGCCACCTCTGTTTGTTGTGCTGTTTGCAATGCAGTCACAGCTGTGCCTCCTCCTGGCACAGAAATGGCCCAGTTGGTTTGTGGAGGCTGCCACACTTTACTCATGTACATTCGTGGAGCCACAAGTGTTCAATGCTCTTGTTGCCACACTGTGAACCTAGCATTAGAAGCAAACCAAGTGGCCCATGTCAACTGTGGGAACTGCAGGATGCTACTGATGTATCAATATGGAGCAAGATCCGTGAAATGCGCTGTCTGCAATTTTGTTACATCAGTTGGGGTCTTAGCAAGCACGACTGAGCAGAAGTTTAGTACCTAA 624 0.4471 MAKLKNRDRERSRTPDSFDRVDLDILPTEMAVNQNCENGRKSCIFLGVEFEKERQHFLAFYIMPVPLAPYPTPPAPYSPPANGAQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGVLASTTEQKFST 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1939 207 SUPERFAMILY Multiheme cytochromes 90 188 IPR036280 -
Alju09g1939 207 NCBIfam zinc finger domain, LSD1 subclass 87 117 IPR005735 -
Alju09g1939 207 NCBIfam zinc finger domain, LSD1 subclass 164 194 IPR005735 -
Alju09g1939 207 NCBIfam zinc finger domain, LSD1 subclass 126 155 IPR005735 -
Alju09g1939 207 Pfam LSD1 zinc finger 129 153 IPR005735 -
Alju09g1939 207 Pfam LSD1 zinc finger 167 191 IPR005735 -
Alju09g1939 207 Pfam LSD1 zinc finger 90 114 IPR005735 -
Alju09g1939 207 PANTHER PROTEIN LSD1 77 117 IPR040319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1939 Alju-ChrAlju09 43198898 43201233 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Alju09g1939 zf-LSD1 1.5e-11 No_clan