Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1938 ATGGTGTCGTGGTGTAGTTGGTTATCACGGGGGAAAAAGTGGAAGGACTTGAACAATCAGGGAATAACAAGACACGAGCCACGATCCCCAGAGATCCTTCAGACACATAGCTTCACTGCTGCATGCCTTCGCTGCTATGTTCTCTCGCGGCAAACTTGGAGCACACTTAGACTCAGACGCCGATCTTCATTTAGCTCTATGGGTTGCACTGGAAAGGAAAAACACATCCGAGCTAATCGAAAATCTCAATCCCAATCCGTCAAGCTAGATAATTGCTGTCTTCATAGAATTTCAATTTCCAAATCTATTATGGAATCAGGCCTCAGGCCACTGAAATACCGTCTGGGTATCGAAGATTCGACTCAAAGCCCGAATCCCGATTCTCACCCTAAAATCAAACTTACTCCTCATGGAGAGGAATGTGGCTGGGGTTACTGTACGGAAGAACACTTGGAAGAAATTCTAATGAAAAACTTGGAGTATTTATACAACGAGGCTATATCAAAGCTTGTTACATTGGGGTATGACGAGGACACTGCTTTAAAAGCAGTATTGCGAAATGGGCATTGTTATCATGGTGGGACGGATTTGCTGACAAATATTTTGCAGAACTCACTGGCTTATTTAAATAGTGATAGTGATGGTGATAGTACTATTACATGTAAAGACAATTCGGATGAGTCAGAGCCTGTCTTCTCAGACTTGAGAGAGTTGGAAGAGTACTCTCTTGCGGTTATGGTCTGTCTCTTGCAGCATTTAAGGCCTCATTTGAGTAAAGGTGATGCCATGTGGTGTTTACTTATGAGTGATCTTCATGTGGGAAAGGCAAATAAAATGGAAATCCCCATGCTTCCTGAGTTAGGCGATGGTAATACTGCTTCTTCTACAGTCGAAACTGCTAACAATTCAGGTGCGATGACCCCATCTCTTTGTAGGCTTCATGGGAGTTGGACATTAGCAAATAGTGGAGACCCTGATTTCCCTGCCAATGGATTATTTTCTTGCGTTGCAGACATGACTTTACACAGAGATATTGAATTCCCAAAGCATTTCAATCTCCCTCCTTCTTTGAAATCATTGTTGAAAAGAAATGTGGCAGTGTTTGCTGCTGGTTTAAGGGCAAACTCAAAACAATTGCAGACAAAAGCAAAAGCACGTCCCAGCAGTAGTTCTTCATCTACCTCGGATTCTCCTCCTGTTCTGGGGTCTAAACCTCCAGTTGAGAATGAGAAGGCAGGGGATTCTCAGGATCAAAATAACCAAGATGCTGTGAATTCAATTCTTAGTAGATTTCGTGATCTAAATTTTGATGAGAATTTGGAGTCTCTGGCAGAAGATCAGAAGGATGAGATGACTTCCACTATACTTCATCATATTAATGATCTTGAGAAACAGGTGCAGGAGCGGAAAGATTGGGCTCATCTGAAGGCAATGCAAGCTGCAAGAAAGCTAAGCAGTGATCTGACTGAGCTGAAAATGTTAAGGATGGAAAGAGAAGAGGCTCAGAGATTGAGGGAAGGGAAACAGGCCCTTGAGGACACAACTATGAAAAAACTTTCAGAGATGGAGATTGCGCTGAGAAAGGCTAGCAGCCAAGTGGACCGTGCCAATGCAGCAGTGAGGAGACTTGAAACTGAGAATGCAGAGATCAAAGCAGAGATGGAGGCTTCTAAGTTGAGTGCTTCAGAGTCAGTCTCAGCTTGCTTGCAAGTTGCAAAAAGAGAGAAAAAGTGCTTGAAGAGGCTTCTGGCTTGGGAAAAACAGAAAGCTAAGCTGCAGGAGGAGATTTCCGATGAGAAAGTTAAGATGCTGGAGGTGTACAAAATGTTGGGTTGGATTAAACGTTGTCAGAAAGAAGTTGAGATCAAGCGGAGGGAGGAGTTGAAGGCTAAAGAGGAAGCCTTAACACTGTTTAAGGAGGAAAAGCGATTGAAGGAAGAAGTAGATGCTAATAACAAGAGGAAGCTTGAGGCTTTGCGGTTAAAGATAGATATAGATTTTCAGCGCCACAAGGATGATTTCCTTAGACTTCAACAGGAACTCTCACGCCTTAAAGCATCTGATCAGCCTGCTAAGTTGCAGCTTCATCACCAACCAAATGGTTCACCAGCGGGTGAGTCTGAGGATGCAAAGCCCCAGAGAGAGACAATTGCAAAGATGCTTCAAGAATTAGATAAACTGGAGGAAATTTCAAAGAAAGAAGAAAACTTTGATAGGGAATGCGTTATATGTAGGAAAGATGAAGTGTCTGTTGTGTTCTTGCCGTGTGCACACCAAGTGATGTGTGGTAGGTGCAGTGATGAGTACTGGAGATGTGGCAACGCTCTTTGTCCTTGCTGCCATGTTTCAATCCAACAGATGATCCGTGTATTTGGGCCAACTTCTTAG 2388 0.4334 MVSWCSWLSRGKKWKDLNNQGITRHEPRSPEILQTHSFTAACLRCYVLSRQTWSTLRLRRRSSFSSMGCTGKEKHIRANRKSQSQSVKLDNCCLHRISISKSIMESGLRPLKYRLGIEDSTQSPNPDSHPKIKLTPHGEECGWGYCTEEHLEEILMKNLEYLYNEAISKLVTLGYDEDTALKAVLRNGHCYHGGTDLLTNILQNSLAYLNSDSDGDSTITCKDNSDESEPVFSDLRELEEYSLAVMVCLLQHLRPHLSKGDAMWCLLMSDLHVGKANKMEIPMLPELGDGNTASSTVETANNSGAMTPSLCRLHGSWTLANSGDPDFPANGLFSCVADMTLHRDIEFPKHFNLPPSLKSLLKRNVAVFAAGLRANSKQLQTKAKARPSSSSSSTSDSPPVLGSKPPVENEKAGDSQDQNNQDAVNSILSRFRDLNFDENLESLAEDQKDEMTSTILHHINDLEKQVQERKDWAHLKAMQAARKLSSDLTELKMLRMEREEAQRLREGKQALEDTTMKKLSEMEIALRKASSQVDRANAAVRRLETENAEIKAEMEASKLSASESVSACLQVAKREKKCLKRLLAWEKQKAKLQEEISDEKVKMLEVYKMLGWIKRCQKEVEIKRREELKAKEEALTLFKEEKRLKEEVDANNKRKLEALRLKIDIDFQRHKDDFLRLQQELSRLKASDQPAKLQLHHQPNGSPAGESEDAKPQRETIAKMLQELDKLEEISKKEENFDRECVICRKDEVSVVFLPCAHQVMCGRCSDEYWRCGNALCPCCHVSIQQMIRVFGPTS 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1938 795 MobiDBLite consensus disorder prediction 376 420 - -
Alju09g1938 795 Coils Coil 575 602 - -
Alju09g1938 795 Coils Coil 717 737 - -
Alju09g1938 795 MobiDBLite consensus disorder prediction 376 400 - -
Alju09g1938 795 ProSiteProfiles Zinc finger RING-type profile. 741 781 IPR001841 -
Alju09g1938 795 Coils Coil 491 514 - -
Alju09g1938 795 Coils Coil 613 633 - -
Alju09g1938 795 CDD RING-HC_MIP1-like 736 790 - -
Alju09g1938 795 Coils Coil 519 560 - -
Alju09g1938 795 MobiDBLite consensus disorder prediction 687 713 - -
Alju09g1938 795 Pfam Family of unknown function (DUF6592) 158 278 IPR046527 -
Alju09g1938 795 Coils Coil 667 687 - -
Alju09g1938 795 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 716 792 IPR013083 -
Alju09g1938 795 SUPERFAMILY RING/U-box 740 787 - -
Alju09g1938 795 Pfam Zinc finger, C3HC4 type (RING finger) 738 787 - -
Alju09g1938 795 PANTHER OS05G0141500 PROTEIN 66 790 IPR046934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1938 Alju-ChrAlju09 43193474 43197249 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1938 09 43193474 43197249 Alju12g0371 12 4533100 4537147 CCT