Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1936 ATGGGAGGTGCGTCACTGCCACCAGGTTTTCGATTCCACCCGACTGATGAAGAACTTGTGGGATATTACCTAAAAAGGAAAGTGGAGGGGCTGGAAATTGAGCTTGAAGTTATACCCGTAATTGATCTTTACAAGTTTGATCCCTGGGAGTTACCTGAGAAATCATTCCTTCCAAAGAGAGATATGGAATGGTTTTTCTTCTGTCCCAGGGATCGAAAGTATCCAAATGGATCAAGAACAAACAGAGCAACCAAAGCTGGATACTGGAAAGCCACCGGAAAAGACAGAAAAATTGTGTGTCACTCTTCTCCTTCCTCTGTCACCGGTTACCGCAAGACTCTGGTTTTCTACTGTGGAAGAGCTCCTTTAGGAGATCGAACAAGCTGGGTCATGCACGAGTATCGCCTCTGTGATGATCTTGCCTCAGGATCATCACCAAGCTTTCAGGGTGCTTTTGCTCTGTGCCGAGTGATCAAGAAGACTGAGAAACCAAATGATGAACAAAAGGGTAAAAAGGCTGGAAACAGTTCTGTTAATGGGAGAGACGACTCAATGAGAATCTCAAATGAACCTTTTAATGTATCTGGTGATGTTTCGTCACAAACAAGTCATCTGTACAATGAGAGTGGCCATTCGAGCCCTATGACTTCTCCCTTCAATGCGGTTCAGACGGCAGAGTTGGAGCAAGCTTCCATGGAGACCAATCCTTCAGATATCTGGATCTCTCCAGATTTTATTCTTGATTCTTCAAAGGACTATCCTGAAGTACAAAATGCTGTGTCTGAATACTTTCCACAGTATGAATTATCAAGCTCAATGATGACCCCATGGCAGCCATTGGAACACACAGAAATTTCACCTTCTTCATCGTACTCAAACTTGAACGGAGAAATTGAATTTGCTGGTGATCTTAGCATGTCAACCTACATGGAACAGGCAAACTTCATGAACTTTTATGGAAATGACCCGATGCCCTATGGAGGTTTTGATCAGATCAATTCAACCACGTATCCTAGACATTTCTGA 1026 0.4337 MGGASLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKIVCHSSPSSVTGYRKTLVFYCGRAPLGDRTSWVMHEYRLCDDLASGSSPSFQGAFALCRVIKKTEKPNDEQKGKKAGNSSVNGRDDSMRISNEPFNVSGDVSSQTSHLYNESGHSSPMTSPFNAVQTAELEQASMETNPSDIWISPDFILDSSKDYPEVQNAVSEYFPQYELSSSMMTPWQPLEHTEISPSSSYSNLNGEIEFAGDLSMSTYMEQANFMNFYGNDPMPYGGFDQINSTTYPRHF 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1936 341 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Alju09g1936 341 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Alju09g1936 341 MobiDBLite consensus disorder prediction 163 217 - -
Alju09g1936 341 Gene3D NAC domain 15 165 IPR036093 GO:0003677|GO:0006355
Alju09g1936 341 ProSiteProfiles NAC domain profile. 6 160 IPR003441 GO:0003677|GO:0006355
Alju09g1936 341 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 223 - -
Alju09g1936 341 MobiDBLite consensus disorder prediction 171 217 - -
Alju09g1936 341 FunFam Nac domain-containing protein 86 15 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1936 Alju-ChrAlju09 43183787 43185561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1936 1 333 NAC Transcription Factor Family AT4G17980 54.464 9.57e-113 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju09g1936 NAM 3.8e-38 No_clan