Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1892 ATGAAGTGCTTCTTGTTCACATTTAAAAGAGGATCAAAATCCTCCTCAGAATCTCAGAAACGAAGACAGAAGAATCATTCGGGTTCAAATCACGCGGTGAATCCAACGAGTTCGCTGCCATCGCCGAGAACCATAACAGAATTGTACAAAGAGAAAGAGCACGATCTGAGAGTTTTCACTTTCCAAGAGCTCCGTGAGGCCACAAATGATTTCAATCGGATGCTGAAGATTGGAGAGGGGGGTTTCGGGAGCGTTTATAAAGGAACAATTAGGCCTCAAGATGGTCGAGGTGATCCTATTGTTGTTGCCATAAAAAAACTTAACACCAGTGGCTTTCAGGGGCATAAACAATGGTTGGCAGAGGTTCAATTTCTGGGTATTGTTAATCACCCAAATTTGGTAAAACTATTGGGATACTGCTCTGAAGATGGAGAGAGAGGAATCCAACGGCTGTTAGTTTATGAGTTCATGCCCAACAGGAGCCTGGAGGATCATCTTTTCAGACGGGCTTTTCCCAGCTTACCGTGGAAAACAAGATTGCAGATCATGATTGGTGCTGCTCAAGGATTACTTTATCTACATGAGGAATTAGAGATTCAGGTAATATACCGAGATTTCAAATCTTCCAATGTTTTATTGGACACGAACTTCTATCCAAAGCTTTCAGATTTTGGTCTTGCTAGGGAAGGTCCAATTGGTGATCAGACCCACGTGTCCACTGCGGTGGTGGGGACACAAGGATATGCTGCCCCAGAATATATAGAAACGGGCCACCTCAAAGTTCAGAGTGATATATGGAGCTTCGGTGTGGTATTATATGAGATGCTTACAGGGAGGCGATCATTAGATAGAAGACAAGCGAAAGAACAGAAGCTTCTAGAGTGGGTTAAACTGTATCCTGCTGATAGTAGGAGGTTCAGCATGATAATGGACCCTCGACTCAGGAATGAGTATTCACATGGTGCTGCTCGTAAAGTAGCCAAGTTGGCAGACAGATGCTTAAACAAGAAACCTGAAGAAAGGCCATCCATGAGTCAGGTTGTGGAAAGCTTGAAGCTAGCATTGCAGTATTCTGAAACTTCAAAAATGGCTTCTGTATCATCTCGACCTAAATTGGTCCCAAGAAGCAAATAA 1134 0.4339 MKCFLFTFKRGSKSSSESQKRRQKNHSGSNHAVNPTSSLPSPRTITELYKEKEHDLRVFTFQELREATNDFNRMLKIGEGGFGSVYKGTIRPQDGRGDPIVVAIKKLNTSGFQGHKQWLAEVQFLGIVNHPNLVKLLGYCSEDGERGIQRLLVYEFMPNRSLEDHLFRRAFPSLPWKTRLQIMIGAAQGLLYLHEELEIQVIYRDFKSSNVLLDTNFYPKLSDFGLAREGPIGDQTHVSTAVVGTQGYAAPEYIETGHLKVQSDIWSFGVVLYEMLTGRRSLDRRQAKEQKLLEWVKLYPADSRRFSMIMDPRLRNEYSHGAARKVAKLADRCLNKKPEERPSMSQVVESLKLALQYSETSKMASVSSRPKLVPRSK 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1892 377 CDD STKc_IRAK 77 352 - -
Alju09g1892 377 Gene3D Transferase(Phosphotransferase) domain 1 157 371 - -
Alju09g1892 377 FunFam Serine/threonine-protein kinase BIK1 39 156 - -
Alju09g1892 377 SUPERFAMILY Protein kinase-like (PK-like) 54 351 IPR011009 -
Alju09g1892 377 Pfam Protein kinase domain 73 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1892 377 ProSiteProfiles Protein kinase domain profile. 71 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1892 377 MobiDBLite consensus disorder prediction 9 43 - -
Alju09g1892 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Alju09g1892 377 ProSitePatterns Protein kinases ATP-binding region signature. 77 106 IPR017441 GO:0005524
Alju09g1892 377 MobiDBLite consensus disorder prediction 28 43 - -
Alju09g1892 377 PANTHER OS01G0588500 PROTEIN-RELATED 22 353 - -
Alju09g1892 377 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 157 365 - -
Alju09g1892 377 Gene3D Phosphorylase Kinase; domain 1 50 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1892 Alju-ChrAlju09 42724381 42726202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1892 3 351 Glycoside Hydrolase AT3G07070 42.382 8.85e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju09g1892 Pkinase 2.1e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1892 09 42724381 42726202 Alju12g0414 12 5036542 5039028 CCT