Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1883 ATGGAGGAACGGTATGAACCACTGAAAGAACTTGGTTCTGGGAATTTCGGAGTGGCCAGGTTGGTGAGAGACAAGATCACCAAGGAGCTTGTTGCTGTCAAGTACATAGAAAGAGGGAAAAAGATTGACGAGAAAGTTCAGAGGGAGATCATTAACCACAGATCTTTAAGGCATCCAAATATAATCAAGTTTAGAGAGGTCTTGCTTACCCCAACTCATTTAGCTATTGTCATGGAGTATGCTGCAGGTGGTGAACTCTTTGAGAGAATTTGCAATGCTGGTCGATTCAGTGAAGATGAGGCGAGATTTTTCTTCCAGCAACTAATATCTGGAGTTAGCTACTGTCACTCAATGCAAATATGTCACAGAGATTTGAAATTGGAAAACACTCTCTTGGATGGAAGTCCAACACCTCGACTCAAAATATGTGACTTCGGTTACTCCAAGTCTGCTATACTGCACTCTCAACCGAAATCTACTGTTGGAACTCCTGCTTACATTGCTCCAGAGGTTCTGTCACGGAAGGAGTACGATGGAAAGATTGCAGATGTTTGGTCATGTGGTGTAACGCTTTATGTCATGTTAGTGGGAGGATACCCATTTGAAGATCCTGAAGATCCTAGGAATTTCCGAAAGACCATTGGAAGAATAATGAGTGTTCAGTACTCCATTCCCGACTACGTACGTGTCTCTGCAGATTGCAGACATCTTCTTTCTCGCATCTTTGTCGCCAATCCTGCCAAAAGGATAACGATCTCAGAGATAAAACAACACCCTTGGTTTTTGAAGAACTTGCCTAAGGAGATCAATGAAGCAGAGAAAAAAGTCAATAAGGAGGCTGCAGAGAAAGATAATCCAGGCCAGAGTGTTGAAGAAATAATGAGAATCGTACAAGAGGCAAGGACGCCGGGGAAAGAATCCAAGGGCGGAGGACAAGCTGGTGGCGGAGGAGGATCATTGGACGGTGAGGATGATGATGAAGAAGAACCGGAACTTGATGTTAGTGGTGACTATACTACAACAGCATAA 1029 0.4363 MEERYEPLKELGSGNFGVARLVRDKITKELVAVKYIERGKKIDEKVQREIINHRSLRHPNIIKFREVLLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPTPRLKICDFGYSKSAILHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGGYPFEDPEDPRNFRKTIGRIMSVQYSIPDYVRVSADCRHLLSRIFVANPAKRITISEIKQHPWFLKNLPKEINEAEKKVNKEAAEKDNPGQSVEEIMRIVQEARTPGKESKGGGQAGGGGGSLDGEDDDEEEPELDVSGDYTTTA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1883 342 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1883 342 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1883 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Alju09g1883 342 SUPERFAMILY Protein kinase-like (PK-like) 3 269 IPR011009 -
Alju09g1883 342 FunFam Serine/threonine-protein kinase SRK2E 1 80 - -
Alju09g1883 342 Coils Coil 262 282 - -
Alju09g1883 342 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1883 342 MobiDBLite consensus disorder prediction 277 342 - -
Alju09g1883 342 MobiDBLite consensus disorder prediction 320 334 - -
Alju09g1883 342 FunFam Serine/threonine-protein kinase SRK2E 81 269 - -
Alju09g1883 342 Gene3D Transferase(Phosphotransferase) domain 1 81 269 - -
Alju09g1883 342 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Alju09g1883 342 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Alju09g1883 342 CDD STKc_SnRK2 4 260 - -
Alju09g1883 342 PANTHER SERINE/THREONINE KINASE 3 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1883 Alju-ChrAlju09 42609946 42612464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1883 4 264 CBL-interacting serine-threonine protein kinases AT4G24400 43.333 1.67e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Alju09g1883 Pkinase 1.3e-71 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1883 09 42609946 42612464 Alju12g0422 12 5125250 5127939 CCT