Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1881 ATGACTTCCAGCGTCGAAGGAAGCGACTTAGCTGAGGTATCTTGTGAGTCTGCAACAACCATGGACTTGTTTCCTACCAAGGAGAATAGCAGAACACCACAAAAATTTTATACAATGAACGTATTTCCGCATCTCGCCACAGAAGAGATTCCGAAGATGGCAAATTCCAGTGTATCTAAGTCTGTCACTAAGGAGCCTAAAGCTGCACAGATGACAGTCTTTTATGGTGGCCAAATTGTTGTGTTCGATGATTTTCCTGCTGAAAAAGTCATGGAGATCTTGGCGTTTGCCAGCAAAGGAACACCCCCTATACAGAACAGCTTTGATTATGCTTTTCCTCAGAGCCAGCCATCGTTTCCTCATAATGCAGCTGGATTTTCTTCTGATTCCCAAAAGCCGGTTTCTCCTAATGTAAATATCATTCCTAATATTTGCAGTACTTTGGTTCAAGGGCGTCCTCAGTCACCATCTGGACCTGTGGTTGGTGACCTTCCGATTGCTAGGAAAGCTTCACTTCATCGGTTCTTAGAGAAGAGGAAGGACAGGATTGCTGCTAGAGCACCGTATCAAACAAGCAACCCCATGGCAGCTCCTCACAAGTCAACCGAATCTATGACATGGCTTGAATTGGCTGCAAAGCCGACCAACACCTGA 654 0.4526 MTSSVEGSDLAEVSCESATTMDLFPTKENSRTPQKFYTMNVFPHLATEEIPKMANSSVSKSVTKEPKAAQMTVFYGGQIVVFDDFPAEKVMEILAFASKGTPPIQNSFDYAFPQSQPSFPHNAAGFSSDSQKPVSPNVNIIPNICSTLVQGRPQSPSGPVVGDLPIARKASLHRFLEKRKDRIAARAPYQTSNPMAAPHKSTESMTWLELAAKPTNT 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1881 217 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 199 IPR040390 -
Alju09g1881 217 SMART tify_2 64 99 IPR010399 -
Alju09g1881 217 Pfam tify domain 65 98 IPR010399 -
Alju09g1881 217 ProSiteProfiles Tify domain profile. 64 99 IPR010399 -
Alju09g1881 217 Pfam Jas motif 165 190 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1881 Alju-ChrAlju09 42602278 42603681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1881 19 213 Tify Gene Family AT1G19180 36.364 1.03e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Alju09g1881 tify 1.6e-14 No_clan