Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1872 ATGGAACTTCATTCTAAATACCAAGTAGGCCTTGTGTGTGTGATGTTGCTCTTACCCACACTATGTATCTCCCAAGACTTTACATCCTCCAGAACTACCTATTATGGTAGCCCTGATTGCTATGGAACTCCAAGGGGAGCTTGTGGATATGGTGAATACGGAAGAACTGTGAACGACGGGAGTGTCGCCGGCGTGTCTGGGCTCTGGAAGAACGGCTCTGGCTGCGGCGCTTGCTACCAAGTGAGGTGTAAGAACGCACAAGTATGCGATGAATATGGGACGTACGTGGTGGTGACGGACTACGGTGAAGGAGACAGGACAGACTTTGTGATGAGTCCACGTGCGTACGCGAGAATGGGAAGGAATCCAGAGGCATCAGAGGAGCTGTTCAAATACGGCGTCGTAGAGGTGGAGTACAGGAGGATTCCCTGCAGGTATGGGGGATACAACATAGTGTTCAAAGTACAGGAGCAAAGCTCATACCCTAACTACATCGCCATTCTGGTGCTGTACGTGGCGGGCCAAAACGACATCACAGCCGCTGAGGTGTGGCAGGAGGATTGCAAGCAATGGAGGCCGTTGAGGAGGGCGTACGGAGCGGTGTTTGATGCCGAGAACCCGCCACGTGGCGACTTGATGTTGAGGTTCAGGGTGAGTGGCCGTGGGGGTGTGTATTGGGTTCAGGCCAAGAATGCTATTCCCAGTGATTGGAAGGCTGGAGAAGCTTATGACTCTCAAGTTCAGCTAGATTAA 753 0.5219 MELHSKYQVGLVCVMLLLPTLCISQDFTSSRTTYYGSPDCYGTPRGACGYGEYGRTVNDGSVAGVSGLWKNGSGCGACYQVRCKNAQVCDEYGTYVVVTDYGEGDRTDFVMSPRAYARMGRNPEASEELFKYGVVEVEYRRIPCRYGGYNIVFKVQEQSSYPNYIAILVLYVAGQNDITAAEVWQEDCKQWRPLRRAYGAVFDAENPPRGDLMLRFRVSGRGGVYWVQAKNAIPSDWKAGEAYDSQVQLD 250
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1872 250 Gene3D - 146 249 IPR036749 -
Alju09g1872 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 149 IPR007112 -
Alju09g1872 250 PANTHER EXPANSIN-B3 16 248 - -
Alju09g1872 250 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Alju09g1872 250 PRINTS Expansin/Lol pI family signature 231 245 IPR007118 GO:0005576
Alju09g1872 250 PRINTS Expansin/Lol pI family signature 191 205 IPR007118 GO:0005576
Alju09g1872 250 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Alju09g1872 250 PRINTS Expansin/Lol pI family signature 132 148 IPR007118 GO:0005576
Alju09g1872 250 SUPERFAMILY PHL pollen allergen 150 245 IPR036749 -
Alju09g1872 250 SUPERFAMILY Barwin-like endoglucanases 13 148 IPR036908 -
Alju09g1872 250 CDD DPBB_EXLB_N 28 144 - -
Alju09g1872 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 163 245 IPR007117 -
Alju09g1872 250 Pfam Expansin C-terminal domain 151 234 IPR007117 -
Alju09g1872 250 PRINTS Major pollen allergen Lol pI signature 221 238 IPR005795 GO:0005576|GO:0019953
Alju09g1872 250 PRINTS Major pollen allergen Lol pI signature 63 74 IPR005795 GO:0005576|GO:0019953
Alju09g1872 250 PRINTS Major pollen allergen Lol pI signature 154 169 IPR005795 GO:0005576|GO:0019953
Alju09g1872 250 PRINTS Major pollen allergen Lol pI signature 170 185 IPR005795 GO:0005576|GO:0019953
Alju09g1872 250 Gene3D - 19 145 IPR036908 -
Alju09g1872 250 Pfam Lytic transglycolase 62 139 IPR009009 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju09g1872 Alju-ChrAlju09 42488085 42489312 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1872 11 249 Expansin Gene Family AT4G17030 62.500 2.42e-113 323