Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1866 ATGCTGTTTTCGTCAGAAGTATATTTAAATGCAAGTGCTCGGAGGAAGTGTGTGTGTGTGTCTTGGTCGGGCAATGTTTTTGATGTTTTTAAGGATGAATGTTGTTGTGGTGGGTGTAGAAATGTGTTCAAGATGGATTCAATTGGTAAGGAGCTACTGGGAATTGCGTTTCCGGCTGCTTTGGCTGTGGCTGCTGATCCCATTGCTTCTCTCATTGACACTGCTTTCATTGGTCACTTGGCAATGGAACTTCACTCTAAATACCAAGTTGGCCTTGTGTGTGTGATGTTGCTCTTACCTGCACTATGCTTATCCCAAGGCTTCACAGACTCCAGAGCCACCTATTACAGTACCCCCGATGGCTATGGAACCCCAACCGGAGCTTGTGGATATGGAGGTTACGGCAGAAGTGTGAACTATGGGAGGGCTGCTGGCGTGTCTGGCTTATGGAGGGGTGGCGCTGGATGTGGTGCTTGCTACCAAGTAAGGTGCAAGGATTCAAGATTATGCGATGAGTATGGAACGATGGTAGTGGCAACAGATTACGGAGCAGGAGACAGAACTGACTTCATTATGAGTCCAAATGCTTTCTCTAAACTGGGACGAAACCCTAGCGCATCGGCCGAGCTCAAGAAATACGGAACCGTAGACATGGAATACAGGAGGGTACCTTGTACGTATGGAGGCTATAACGTTCGTATCAAGATCCACGAGTCTAGCAGATACCCTGATTACCTTGCTCTTGTCATTCTCTACGTGCCTGGCATGAATGACGTCACTGGCGTTGAGATCTATGACAATGATGGACATGAATGGAAGGCAATGAGGAGAGTGTACGGGGCAGTGTTTGATATAGTTGGCGCACCAAGTGGGCCGTTGAAGCTGAGGCTGCAATTCAGTGGAAGAACAGGTTGGGTTCAGTCCTCCAAGAGTGTCATTCCTGGAGATTGGAAGATTGGAGCTTCTTACGACTCTCAAGTTCATGTCTGA 990 0.4788 MLFSSEVYLNASARRKCVCVSWSGNVFDVFKDECCCGGCRNVFKMDSIGKELLGIAFPAALAVAADPIASLIDTAFIGHLAMELHSKYQVGLVCVMLLLPALCLSQGFTDSRATYYSTPDGYGTPTGACGYGGYGRSVNYGRAAGVSGLWRGGAGCGACYQVRCKDSRLCDEYGTMVVATDYGAGDRTDFIMSPNAFSKLGRNPSASAELKKYGTVDMEYRRVPCTYGGYNVRIKIHESSRYPDYLALVILYVPGMNDVTGVEIYDNDGHEWKAMRRVYGAVFDIVGAPSGPLKLRLQFSGRTGWVQSSKSVIPGDWKIGASYDSQVHV 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1866 329 PRINTS Expansin/Lol pI family signature 107 122 IPR007118 GO:0005576
Alju09g1866 329 PRINTS Expansin/Lol pI family signature 146 164 IPR007118 GO:0005576
Alju09g1866 329 PRINTS Expansin/Lol pI family signature 213 229 IPR007118 GO:0005576
Alju09g1866 329 PRINTS Expansin/Lol pI family signature 311 325 IPR007118 GO:0005576
Alju09g1866 329 SUPERFAMILY PHL pollen allergen 231 325 IPR036749 -
Alju09g1866 329 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 244 325 IPR007117 -
Alju09g1866 329 Gene3D - 226 326 IPR036749 -
Alju09g1866 329 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 126 230 IPR007112 -
Alju09g1866 329 Pfam Lytic transglycolase 143 219 IPR009009 -
Alju09g1866 329 Pfam Expansin C-terminal domain 232 314 IPR007117 -
Alju09g1866 329 PANTHER EXPANSIN-B3 98 328 - -
Alju09g1866 329 CDD DPBB_EXLB_N 109 225 - -
Alju09g1866 329 SUPERFAMILY Barwin-like endoglucanases 94 229 IPR036908 -
Alju09g1866 329 Gene3D - 101 225 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1866 Alju-ChrAlju09 42440239 42442315 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1866 92 327 Expansin Gene Family AT4G17030 51.883 2.69e-83 250