Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1862 ATGGATTCAATTGGTAAGGAGCTACTGGGAATTGCGTTTCCTTCTGCTTTGGCTGTGACTGCTGATCCCATTGCTTCTCTCATTGACACTGCTTTCATTGGTCACTTGGCAATGGAACTTCACTCTAAATACCAAGTTGGCCTTGTGTGTGTGATGTTGCTCTTACCTGCACTATGCTTATCCCAAGGCTTCACAGACTCCAGAGCCACCTATTACAGTACCCCCGATGGCTATGGAACCCCAACCGGAGCTTGTGGATATGGAGGTTACGGCAGAAGTGTGAACTATGGGAGGGCTGCTGGCGTGTCTGGCTTATGGAGGGGTGGCGCTGGATGTGGTGCTTGCTACCAAGTAAGGTGCAAGGATTCAAGATTATGCGATGAGTATGGAACGATGGTAGTGGCAACAGATTACGGAGCAGGAGACAGAACTGACTTCATTGTGAGTCCAAATGCTTTCTCTAAACTGGGACGAAACCCTAGCGCATCGGCCGAGCTCAAGAAATACGGAACCGTAGACATGGAATACAGGAGGGTACCTTGTACGTATGGAGGCTATAACGTGCGTATCAAGATCCACGAGTCTAGCAGATACCCTGATTACCTTGCTCTTGTCATTCTCTACGTGCCTGGCATGAATGACGTCACTGGCGTTGAGATCTATGACAATGATGGACATGAATGGAAGGCAATGAGGAGAGTGTACGGGGCAGTGTTTGATATAGTTGGCGCACCAAGTGGGCCGTTGAAGCTGAGGCTGCAATTCAGTGGAAGAACAGGTTGGGTTCAGTCCTCCAAGAGTGTCATTCCTGGAGATTGGAAGATTGGAGCTTCTTACGACGCTCAAGTTCATGTCTGA 858 0.4907 MDSIGKELLGIAFPSALAVTADPIASLIDTAFIGHLAMELHSKYQVGLVCVMLLLPALCLSQGFTDSRATYYSTPDGYGTPTGACGYGGYGRSVNYGRAAGVSGLWRGGAGCGACYQVRCKDSRLCDEYGTMVVATDYGAGDRTDFIVSPNAFSKLGRNPSASAELKKYGTVDMEYRRVPCTYGGYNVRIKIHESSRYPDYLALVILYVPGMNDVTGVEIYDNDGHEWKAMRRVYGAVFDIVGAPSGPLKLRLQFSGRTGWVQSSKSVIPGDWKIGASYDAQVHV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1862 285 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 82 186 IPR007112 -
Alju09g1862 285 Gene3D - 182 281 IPR036749 -
Alju09g1862 285 Gene3D - 57 181 IPR036908 -
Alju09g1862 285 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 200 281 IPR007117 -
Alju09g1862 285 Pfam Expansin C-terminal domain 188 270 IPR007117 -
Alju09g1862 285 SUPERFAMILY PHL pollen allergen 187 280 IPR036749 -
Alju09g1862 285 PRINTS Expansin/Lol pI family signature 169 185 IPR007118 GO:0005576
Alju09g1862 285 PRINTS Expansin/Lol pI family signature 63 78 IPR007118 GO:0005576
Alju09g1862 285 PRINTS Expansin/Lol pI family signature 267 281 IPR007118 GO:0005576
Alju09g1862 285 PRINTS Expansin/Lol pI family signature 102 120 IPR007118 GO:0005576
Alju09g1862 285 PANTHER EXPANSIN-B3 54 283 - -
Alju09g1862 285 SUPERFAMILY Barwin-like endoglucanases 50 185 IPR036908 -
Alju09g1862 285 CDD DPBB_EXLB_N 65 181 - -
Alju09g1862 285 Pfam Lytic transglycolase 99 175 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1862 Alju-ChrAlju09 42413674 42415619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1862 48 283 Expansin Gene Family AT4G17030 51.464 1.30e-83 249