Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1859 ATGGGGGTTATGGAGAATATGCCACATTCGAAGTCATTAGCCAGGGTTACTTCAACCAATAACGATGAAAGATCTGGGAAACCATCGATGGAAAATGGGTATTGCACTGTTTCTAACAAGGTCATTTTTAAGCGCAGAAAAGTTTCTGCCGTTCGCGATTATCCTGCGGGTTGTGGACGGCATGCGCCCAGAATTGATTTAACACCAAATGTAAATATTGCTAACTCTGGTATTGATGGAGGTACACTAGTCGAGGGTAAGAATGGTGAAGATTTAAAGGATGGATTTGTTAGAACTTCCAAGCTTGAAGATGAGTCCCAACATACTGTGTTTCCTACTCAGACTCTTGGACAATCCAATGACTATAGTCTGAAGGAGGAAACACCTAGAACTGTGGATGAGCCTCCTTTGACAAATGATGAAACTTTAAAAATAGGGCCTGTGGGCTTGGAAGATTGGGAATCCAGAAGAACTGCAGAAACGGTAATATGTGATTCTTCTAACGTATCAAAAGACTTGCATAAAAATGGCCCTTCTTCTCCAGTAGGTGAGGTGGTTTTGTCAGGTAGTAAATTCTTGCCACCGAATGCAAGTATGGGTGATGATAAGACTGTAATGAGAAGGCATTTTCCCAAAAGACGAGTTTCGGCCACCAGAGACTTTCCTCCTTTTTGTGGAAGAAATGCTCTGCGCCTTGATAAGGATAAGTGTTTAGAGGAGATCTCTTCTCGGGATAACAAAATCATGGGTCAAAAGGACTTGGCTGTGGATGACAAGGGATTGAGCAGGGTCACGACCTCTGATGTGAAAGAAGTGGAAAAGAACGTTGAATGTGGAGATGCTTGCAATCCAGTGAATATGGTTCAAGGTGATTTTGAAGGGAATGTTATGCAGGAAGTGAATAGGTTGGATGGAATTGGACCATCTTCTGAGTTGAAATTGCTACCAAAAAATCCAGGAGATAAGGACATGGCACTTCCTGATGGAAGCACTCACAATCAGGTATTAACAAGTTCCCCAACCGAAGTTGAAGAGGAAAGCAGATATCCTATACAGGTTGAGGGAACACTAGGAAAGGACATAGTAGTTGAAGAAGAAAGCAGAGATGCTATACAGGTTGAGGGAACAGTAGGAAAGGAGATAGTAGTTTATTCAGGAGCTCAAGGCCTGGTGACAGAGCCTCTGGGTACATCTTCTTGCCATCATAAGTCTAAAGGAGATGTCAATGAATTGCAGGCTCCATCTAGCAGGGTAGTTGTGCTATGTCTGATGGCTGATTCAACATGTCCTTGGAGGAACCGTATAGGCACTCCCAAATCTAGCATGGTTGGTGGTAAAAATAAAAGTAAGGTAAAGAAAATTGATTATTCTGCACAGTTTAACCGGTCTAAAGCTGCTACCAAGTCTAAAGACTCGCCAAATTGTTCTGGGAAGAAGCCTATAATTAAAAAAAAAGGAAGCTGCGCCGCAGATGGTATGGGTCAACTAGTGGTTTGGGAGAATAAAGATACGCTTGACTCTGATAAAAATATGGAAGAGACAAGTGTTTTCCCAAAATCCCAAGGTTATGAAGTTCAATTTCCTCCTTTTGGTCATGGAAATCTAAGTGGAAATGATAAGGGCTCAAATGTGACACGAAATAAAGTGAGGGAGACATTGCGCCTTTTCCAAGCTGTTGCTAGAAAGCTATTGCAGGAGGAAGAAGCAAAGCCAAAAGCCAAAGCAAACAGTAATAGAAAGGTGAGGATTGATACAATAGCAGCTAAGATCCTTAAGGATAAAGAGAAATCAGTTAACACAGGGAAGCCGATCCTGGGACTTGTCCCTGGGGTTGAAGTTGGTGATGAATTTCAGTACTGGGTGGAACTTAATCTGATTGGCCTTCATCGCCCGCCTCAGTCAGGCATAGATTATGTAAAACATGATGATAAGATCCTTGCAACTAGTGTGGTTTCATCTAAGGGTTATGCTGATGAGTCAGGCAGTTCAGATGTCTTGACTTATACAGGGCAGGGAGGAGGTATGTTAAAGAATGGTAAAGAACCAGAAGATCAGAAGCTTGAGAGGGGCAATCTTGCATTGAAGAATAGTGTTGCAGAAAAGAATCCTGTCAGGGTAATACGTGGCTGTGAATCAAGAGATGGAAAAAGGAGATATGTTTATGATGGGCTATATGAAGTTGAGGCATATTGGCAGGAAATGGGTCCACATGGTAAGTTGGTTTTTAGGTTTCGGATGCGAAGAATCCCAGGCCAACCAGAACTTGCTTGGAAAGAGGTAAAGGAATGCAAAAAATTCAAAAAAAGAGAGGGTGTATGTGTTGATGACATTTCTAATGGGAAAGAGCCAATTCCAATATGTGCTGTGAACACCATAGATGATGAAAAACCTCCACCGTTTGAATACACAACCAGAATGATATATCCTAATTGGTGCAATCCCATTCCTCTAGAGGGATGTAGTTGTACAAATGGATGCTCTGACTCTGAAAAATGTTCTTGTGCGGTCAAAAATGGGGGAGAGATCCCGTACAACCACGATGGGGCCATTGTAGAAGCAAAGTCTCTTGTGTATGAGTGTGGCGCTTCTTGCAAGTGTCCTCCAGCATGTCATAACAGAGTCAGTCAACATGGCATAACATTTCAACTTGAAATTTTTAAAACCAGGACAAGAGGATGGGGTGTGAGATCCCTAAATTCCATTCCTTCAGGAAGTTTTATCTGTGAATATATAGGAGAGCTTCTTGAAGAGAAGGAAGCAGAACGAAGAACTGGTAATGATGAATATCTGTTTGATATCGGGAATACCACCAATAATACTCTTTGGGATGGACTTTCTAGCCTACTGCCTGAGGCACAGTCAAGTTCTTGTGAAATTGTGGAAAATAGTGGCTTCACCATTGATGCTGTCCAGTATGGCAATGTTGGGAGATTTATCAACCATAGTTGCTCTCCTAATCTTTATGCTCAAAATATTGCACTGGTAGGATGTATTGAGGCTTGCAAAGAGAATGGCTTAAATCCTGGTTACAAGTTTGCCTGCTGCTTTGGGTTTAAAATTATGACAGAGAGCCATCATTAG 3081 0.4193 MGVMENMPHSKSLARVTSTNNDERSGKPSMENGYCTVSNKVIFKRRKVSAVRDYPAGCGRHAPRIDLTPNVNIANSGIDGGTLVEGKNGEDLKDGFVRTSKLEDESQHTVFPTQTLGQSNDYSLKEETPRTVDEPPLTNDETLKIGPVGLEDWESRRTAETVICDSSNVSKDLHKNGPSSPVGEVVLSGSKFLPPNASMGDDKTVMRRHFPKRRVSATRDFPPFCGRNALRLDKDKCLEEISSRDNKIMGQKDLAVDDKGLSRVTTSDVKEVEKNVECGDACNPVNMVQGDFEGNVMQEVNRLDGIGPSSELKLLPKNPGDKDMALPDGSTHNQVLTSSPTEVEEESRYPIQVEGTLGKDIVVEEESRDAIQVEGTVGKEIVVYSGAQGLVTEPLGTSSCHHKSKGDVNELQAPSSRVVVLCLMADSTCPWRNRIGTPKSSMVGGKNKSKVKKIDYSAQFNRSKAATKSKDSPNCSGKKPIIKKKGSCAADGMGQLVVWENKDTLDSDKNMEETSVFPKSQGYEVQFPPFGHGNLSGNDKGSNVTRNKVRETLRLFQAVARKLLQEEEAKPKAKANSNRKVRIDTIAAKILKDKEKSVNTGKPILGLVPGVEVGDEFQYWVELNLIGLHRPPQSGIDYVKHDDKILATSVVSSKGYADESGSSDVLTYTGQGGGMLKNGKEPEDQKLERGNLALKNSVAEKNPVRVIRGCESRDGKRRYVYDGLYEVEAYWQEMGPHGKLVFRFRMRRIPGQPELAWKEVKECKKFKKREGVCVDDISNGKEPIPICAVNTIDDEKPPPFEYTTRMIYPNWCNPIPLEGCSCTNGCSDSEKCSCAVKNGGEIPYNHDGAIVEAKSLVYECGASCKCPPACHNRVSQHGITFQLEIFKTRTRGWGVRSLNSIPSGSFICEYIGELLEEKEAERRTGNDEYLFDIGNTTNNTLWDGLSSLLPEAQSSSCEIVENSGFTIDAVQYGNVGRFINHSCSPNLYAQNIALVGCIEACKENGLNPGYKFACCFGFKIMTESHH 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1859 1026 MobiDBLite consensus disorder prediction 11 31 - -
Alju09g1859 1026 SUPERFAMILY PUA domain-like 589 761 IPR015947 -
Alju09g1859 1026 SMART set_7 881 1019 IPR001214 GO:0005515
Alju09g1859 1026 MobiDBLite consensus disorder prediction 124 144 - -
Alju09g1859 1026 SUPERFAMILY SET domain 764 992 IPR046341 -
Alju09g1859 1026 Pfam SET domain 892 991 IPR001214 GO:0005515
Alju09g1859 1026 ProSiteProfiles Pre-SET domain profile. 818 878 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju09g1859 1026 MobiDBLite consensus disorder prediction 330 345 - -
Alju09g1859 1026 SMART preset_2 774 865 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju09g1859 1026 MobiDBLite consensus disorder prediction 1 31 - -
Alju09g1859 1026 Pfam SAD/SRA domain 605 752 IPR003105 -
Alju09g1859 1026 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 449 992 - -
Alju09g1859 1026 MobiDBLite consensus disorder prediction 316 346 - -
Alju09g1859 1026 Pfam Pre-SET motif 777 873 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Alju09g1859 1026 ProSiteProfiles SET domain profile. 881 1017 IPR001214 GO:0005515
Alju09g1859 1026 ProSiteProfiles YDG domain profile. 606 748 IPR003105 -
Alju09g1859 1026 Gene3D - 587 768 IPR036987 -
Alju09g1859 1026 SMART G9a_1 601 752 IPR003105 -
Alju09g1859 1026 Gene3D SET domain 769 1003 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1859 Alju-ChrAlju09 42362047 42366860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1859 543 993 Su(var)3-9 homologs AT5G04940 39.615 4.63e-95 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju09g1859 SAD_SRA 9.3e-47 CL0178