Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1839 ATGAAGACCAATCCCAACGTGGTCTCTGGCCGACGTACACACAGTACTCTCTGCTTCTTAGTTATAGTACCTACGCCCTTCCTCTCCTGTTTATTGCCCCATAAACGCACGCTCCCTCCCTCTCTATTATCAACTTCTGATTCTAAAGCTCAGTCGCTTAGTTTCATGGCTATCCTCAATATCCTCACACTCCTTCTATTGCTTCCGCTTCATTTGGCTTTTGGAAACGTCACTTTGAGTTCAACGCTCTATGCCAATGATCGGAAGTCTTCATGGCTCTCAGCGTCCAAAGAATTTGCTTTTGGATTTCACCAGATCCATAACAAGAGCAAAAACCTCTTCTTGCTTGCCATCTGGTTCGACAAAATACCTGACAAGACCATTGTCTGGAACGCAGACATATCAGATCCAGTACCTCTAGGGACCAAGCTTCAGCTCACACCAACGGGTCTCTCACTCACTAACCCCCAAGGTCAAGTTTTGTGGGCAATCGAACCACAAGAAGATGTGTCCTATGCAGCCATGCTTGACACGGGAAATTTCGTTCTGGTATCCTCCAATTCTAATTTGTGGCAGAGTTTCAACAATCCCACCGACACACTCTTGCCCACTCAAACTTTGGATCTGAACAGTAAGTTATCTTGTCGGTTGTCATCACTCAATTACACGAAGGGAAGGTTTGAGCTTTATTTTGATAATGGAAATATCTCCTTAAGTCAAATTGGGTGGCCGGCTGAATTCCGTTACGACAAGTATTTTAGTATTAGCACGAGTTCTAATGACTCCGCCACACAACTAGTCTTCAATTCGTCGGGATATGTTTATGTGAAGACAAAGAGTGGAGATCAAAAACCTCTGGGGTTGAGTGATTCAAGCCTTCCTGTTAGAAGATATTATTACAGGGCCACGCTTGATTCTTATGGAGTATTCTCGTTGTACTCCCACCCCAAGGAATCCAACGAAGATCAAGTTTGGTCAATTGCGGGGCACGTTCCTGATAACATTTGTACTGCAATATTTAGTGATATGGGTAGTGGTTCGTGCGGCTATAATAGCTACTGCTCTTGGGATGACAAAAACAAGAGGCCAACATGTACGTGTCCAAAAGGATATTTCTTGGTAGATCCAAACGACAATTTTGGAGGATGCCAACCTGATTTGCCCCTTGGTTGTGGAGCCGATGATGCGCCATCACGAGAAAATCCACAAGACGTATATGACATGGAGCCTTTGCAAAGTGTGAACTGGCCTCTTGGAGATTATGACAGGTTGGTCAATCACTCCCAGGATGAATGTAAAATCTCTTGCTTGAATGATTGCAATTGTGCGGTTGCTATCTCTAACACTGCAAATGATTGTTGGAAGAAAAGATTGCCCCTTTCTAACGGAAGATTCTCTGCAAGTGAGGGTGGAACAACAGCGCTCTTAAAGATTAGAATTCAACCACTGGCTAATCTTAATCATCCTTCTCGGAAAAAGGAAGATCGGGTCCGACCCGCTTTGATTGGGTCGCTTATTGGGTCCCTTGTCATTATTACTCTATTGGTAGCCACTTTTGTTTCCATTATTCTCTTGAAGCCAAAGAAGACTATTCATCATGTTTCAAGTCTTGTCGAGACAAATGAGACAAATATGCATTCTTTCTCATACGAAGCACTGAAGGAGGCAACAAATGAGTTTAATGAAGAAGTAGGAAGGGGTTCCTTTGGCATTGTGTACAAAGGCACCCTCAATTCAATGACCAATAATACTGTTATTGCAGTGAAAAGATTGGATAGGTTGGCTCAAGAACGAGAGAAGGAGTTTAGGAATGAGTTGAGCGCTATTGGGAACACATGCCACAAAAATCTGGTCCGGTTGATTGGGTTCTGTGACGAGGGAGTTCATAGACTTCTGGTGTACGAGTTCATGAGCAATGGTACTCTCGCAGATATTCTCTTTGGAAAATTCAAACCCCATTGGAATATAAGGGTCAACTTTGCTTTGGGAATTGTAAGGGGATTGCTCTACTTACATGAAGAGTGTGACACTCCTATTATTCATTGTGATATAAAACCTCAAAACATACTCATAGATGAACATTTGAGGGTAAAAATCTCAGATTTTGGGCTGGCCAAGTTGTTGCATTTCAATCAGAGTCGAACCCACACAATGATAAGAGGAACGAGAGGGTATGTAGCACCAGAATGGTTCAAGAATGTTCCAGTGACGGCTAAGGTGGATGTGTATAGCTATGGCGTGATGCTGCTAGAGATAATTTGTTGCAGAAAAAGTGTGGAAAAGGATATGGGTGAAGTGGGCGAAGAAGAAGCAATACTGACAGATTGGGCTTATGATTGCTATATGGAGGGAAAAATAGACATTCTGGTAGAGAACGATGAGGAGGCCATGGCTGACATAGGGAGGTTGAAGAAGTGGGTGGTGATAGCAATGTTGTGCATTCAAGAGAATCCTGATGTGAGGCCAAGCATGAAGACTGTGATGCAAATGTTAGAAGGCCCCGTTGACATTCCAAATCCATCACCGCCTTCCTTCTACACAAATGTTTGA 2550 0.4329 MKTNPNVVSGRRTHSTLCFLVIVPTPFLSCLLPHKRTLPPSLLSTSDSKAQSLSFMAILNILTLLLLLPLHLAFGNVTLSSTLYANDRKSSWLSASKEFAFGFHQIHNKSKNLFLLAIWFDKIPDKTIVWNADISDPVPLGTKLQLTPTGLSLTNPQGQVLWAIEPQEDVSYAAMLDTGNFVLVSSNSNLWQSFNNPTDTLLPTQTLDLNSKLSCRLSSLNYTKGRFELYFDNGNISLSQIGWPAEFRYDKYFSISTSSNDSATQLVFNSSGYVYVKTKSGDQKPLGLSDSSLPVRRYYYRATLDSYGVFSLYSHPKESNEDQVWSIAGHVPDNICTAIFSDMGSGSCGYNSYCSWDDKNKRPTCTCPKGYFLVDPNDNFGGCQPDLPLGCGADDAPSRENPQDVYDMEPLQSVNWPLGDYDRLVNHSQDECKISCLNDCNCAVAISNTANDCWKKRLPLSNGRFSASEGGTTALLKIRIQPLANLNHPSRKKEDRVRPALIGSLIGSLVIITLLVATFVSIILLKPKKTIHHVSSLVETNETNMHSFSYEALKEATNEFNEEVGRGSFGIVYKGTLNSMTNNTVIAVKRLDRLAQEREKEFRNELSAIGNTCHKNLVRLIGFCDEGVHRLLVYEFMSNGTLADILFGKFKPHWNIRVNFALGIVRGLLYLHEECDTPIIHCDIKPQNILIDEHLRVKISDFGLAKLLHFNQSRTHTMIRGTRGYVAPEWFKNVPVTAKVDVYSYGVMLLEIICCRKSVEKDMGEVGEEEAILTDWAYDCYMEGKIDILVENDEEAMADIGRLKKWVVIAMLCIQENPDVRPSMKTVMQMLEGPVDIPNPSPPSFYTNV 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1839 849 ProSiteProfiles Bulb-type lectin domain profile. 74 196 IPR001480 -
Alju09g1839 849 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 72 195 - -
Alju09g1839 849 Gene3D Transferase(Phosphotransferase) domain 1 637 837 - -
Alju09g1839 849 Gene3D - 197 324 IPR036426 -
Alju09g1839 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 679 691 IPR008271 GO:0004672|GO:0006468
Alju09g1839 849 SMART blect_4 80 197 IPR001480 -
Alju09g1839 849 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 81 842 - -
Alju09g1839 849 SUPERFAMILY Protein kinase-like (PK-like) 541 832 IPR011009 -
Alju09g1839 849 ProSitePatterns Protein kinases ATP-binding region signature. 564 589 IPR017441 GO:0005524
Alju09g1839 849 CDD STKc_IRAK 564 833 - -
Alju09g1839 849 Gene3D - 77 196 IPR036426 -
Alju09g1839 849 Gene3D Phosphorylase Kinase; domain 1 523 636 - -
Alju09g1839 849 ProSiteProfiles Protein kinase domain profile. 558 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1839 849 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 637 839 - -
Alju09g1839 849 Pfam Protein kinase domain 560 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1839 849 SMART serkin_6 558 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1839 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 128 219 IPR036426 -
Alju09g1839 849 Pfam D-mannose binding lectin 127 212 IPR001480 -
Alju09g1839 849 FunFam S-receptor-like serine/threonine-protein kinase 528 636 - -
Alju09g1839 849 PIRSF SRK 48 849 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1839 Alju-ChrAlju09 42214259 42216808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1839 539 833 Receptor kinase-like Gene Family AT1G60800 40.728 4.87e-68 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju09g1839 Pkinase 1.1e-49 CL0016