Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1836 ATGTCCGGGCCCACCAGCTACGACTCCAATTTAGCCTTTTTGGAATCCATTAGCTGTCACTTGCTCGGTGAATCCGATGCTGCTCCGGCTGATACAACCAGCAAAACCCCTCTTTACTCTCGGAGCTTCGGTTTCAACAGATTGGATCACTGGGGAGAATTGCCTCTCACACAGCATGAACCCGAAGACATGCCGCTCTGCGGTGTATTACGGGATACACTCCAAGTCGGATGGGCCCCAACCGTGAACTGCACGTCACCGGAGACCGTCTGCTCGGCTTTTCCGTCCACCATTCCGGTGAAACCGGAGCCGGATGTAGTACAGGCGGCGGCCGCACCGCAGGAGAAGGCAAGGCATTACCGAGGAGTGCGTCAACGGCCATGGGGGAAGTTTGCGGCGGAGATCCGGGACCCGGCTAAGAATGGGGCTCGGGTATGGCTGGGGACATTTGAGACTGCGGAGGACGCGGCTCTGGCATACGACCGAGCCGCCTACAGGATGCGGGGCTCGCGGGCTCTTGTTAATTTTCCGCAGAGGGTGAACTCGGGTGAGCCGGAGCCAGTGAGAGTGAGGACGAAGAGGTCTTCGTCGGAGACTGGGAAGCGAAAGGAGAAGGTGGCGAGAAGGGAAGTGGCGTCTTGTACAAATGGACAGCATCTATTGGTCAGCTAA 672 0.5789 MSGPTSYDSNLAFLESISCHLLGESDAAPADTTSKTPLYSRSFGFNRLDHWGELPLTQHEPEDMPLCGVLRDTLQVGWAPTVNCTSPETVCSAFPSTIPVKPEPDVVQAAAAPQEKARHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALVNFPQRVNSGEPEPVRVRTKRSSSETGKRKEKVARREVASCTNGQHLLVS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1836 223 MobiDBLite consensus disorder prediction 182 212 - -
Alju09g1836 223 PRINTS Ethylene responsive element binding protein signature 120 131 IPR001471 GO:0003700|GO:0006355
Alju09g1836 223 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Alju09g1836 223 FunFam Ethylene-responsive transcription factor 2 118 178 - -
Alju09g1836 223 PANTHER DNA-BINDING DOMAIN 99 198 IPR044808 GO:0003700|GO:0009873
Alju09g1836 223 SMART rav1_2 119 183 IPR001471 GO:0003700|GO:0006355
Alju09g1836 223 SUPERFAMILY DNA-binding domain 119 178 IPR016177 GO:0003677
Alju09g1836 223 ProSiteProfiles AP2/ERF domain profile. 119 177 IPR001471 GO:0003700|GO:0006355
Alju09g1836 223 Gene3D AP2/ERF domain 118 179 IPR036955 GO:0003700|GO:0006355
Alju09g1836 223 CDD AP2 119 177 IPR001471 GO:0003700|GO:0006355
Alju09g1836 223 MobiDBLite consensus disorder prediction 186 210 - -
Alju09g1836 223 Pfam AP2 domain 119 169 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1836 Alju-ChrAlju09 42204571 42205242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1836 1 190 AP2-EREBP Transcription Factor Family AT4G17500 50.909 1.05e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju09g1836 AP2 1.1e-14 CL0081