Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1822 ATGGGCAATGACCCAAAATTATGCTGGTTGGGCATCTATTGTGTACCCTTGCTCTCTTGTTGGATTCTGGAAGTCACTATTGTAGTCACTTGTATATTTATTTCCGTTAATCTTACTGATGTGCAATGCCAAATAACAAATAACCTTATTAAAATCCAATATTTGAGACAAGCAGTACACTTGGATAAGCTGACTCAGACGGTCAGGAAGAATACTCATAGCATAAAGCCAAGACTAATACTATCAAACTATATCAGCTATCAGCTATCTCTCACACGAGGCTGATCATGTGTTTCGGATCATCTTGTTACCCGATACTCTGAAGCTCAAGCCTCGTTTATTAGTCTATTTGATCTGATTTTAGCTGAATCCGAATCCGTTGGTATGACTCGGCGATGTTCTCATTGCAGCCACAATGGCCATAACTCAAGGACTTGCCCGAACCGCGGTGTTAAGCTCTTTGGAGTTCGATTGACGGATGGCTCGATCAGGAAGAGTGCTAGTATGAGTAGTCTCAGCCACTATGCCGGGTCGAGCTCCGGAGCTCATCATGCCGGGTCCGTCAATTCGGGTTCGCCCTGTGAGACGCCTGATCATGGTGCTGCAGCCGACGGTTACGCCTCCGAGGATTTTGTTCCTGGTTCATCTTCAGTTTCCCGGGAGAGGAAGAAGGGTGTTCCGTGGACTGAGGAGGAACATAGATTGTTCTTACTTGGGTTGCAGAAGCTTGGCAAAGGTGATTGGCGTGGAATTGCACGGAATTATGTTATATCAAGGACACCTACTCAAGTAGCAAGCCATGCTCAGAAATATTTCATCAGGCAAAGCAACGTGTCTAGGAGGAAAAGACGCTCAAGTTTGTTTGACATTGTTGCTGATGAAAGTGCTGATACACCAATGGAAGAACAGGACCTCTTGCCAGCTAGTCAGCCAGAGGATGAAACAGAAGGCAACGACCCCTTGCCAGCTCCCCCAGCCATTGATGAAGAGTGTGAATCCATGGATTCCGCTTATTCGAATGATGGATACTCTGCCTCGGCCTCTTTAAAGCATGATAGCTCACAGCCACACTCACAGTTCCCAGTGCTATATCCAGCTTACTTTTCTCCTTTCTTCCCAGTTCCTCTGCATTTTTGGTCTGGATACAGTCCAGAGCCCACCAAGATTGAGACAGTACATGAAGTGCTGAAGCCTACTGCAGTACATTCTAAAAGCCCCATCAATGTTGATGAACTGGTTGGCATGTCAAAACTCAGTTTAGGGGACTCTATTGCTGACTCTGGCCCTTCCTCTCTTTCGCTAAAACTCCTCGAGGGACCCTCTCGGCAGTCAGCTTTTCATGCAACTCCCTCATATGGTAATTCAGACATGAATGGCAATGCAATCCCTGCCTTTTGCCTGAGTTAA 1407 0.4627 MGNDPKLCWLGIYCVPLLSCWILEVTIVVTCIFISVNLTDVQCQITNNLIKIQYLRQAVHLDKLTQTVRKNTHSIKPRLILSNYISYQLSLTRGXSCVSDHLVTRYSEAQASFISLFDLILAESESVGMTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMSSLSHYAGSSSGAHHAGSVNSGSPCETPDHGAAADGYASEDFVPGSSSVSRERKKGVPWTEEEHRLFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADESADTPMEEQDLLPASQPEDETEGNDPLPAPPAIDEECESMDSAYSNDGYSASASLKHDSSQPHSQFPVLYPAYFSPFFPVPLHFWSGYSPEPTKIETVHEVLKPTAVHSKSPINVDELVGMSKLSLGDSIADSGPSSLSLKLLEGPSRQSAFHATPSYGNSDMNGNAIPAFCLS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1822 468 Gene3D - 226 278 - -
Alju09g1822 468 ProSiteProfiles SANT domain profile. 228 276 IPR017884 -
Alju09g1822 468 MobiDBLite consensus disorder prediction 291 355 - -
Alju09g1822 468 MobiDBLite consensus disorder prediction 180 225 - -
Alju09g1822 468 NCBIfam myb-like DNA-binding domain, SHAQKYF class 223 275 IPR006447 GO:0003677
Alju09g1822 468 SMART sant 224 274 IPR001005 -
Alju09g1822 468 ProSiteProfiles Myb-like domain profile. 220 272 IPR001005 -
Alju09g1822 468 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 220 276 IPR017930 -
Alju09g1822 468 MobiDBLite consensus disorder prediction 180 194 - -
Alju09g1822 468 PANTHER TRANSCRIPTION FACTOR KUA1 131 403 - -
Alju09g1822 468 CDD SANT 227 272 IPR001005 -
Alju09g1822 468 Pfam Myb-like DNA-binding domain 227 272 IPR001005 -
Alju09g1822 468 SUPERFAMILY Homeodomain-like 222 277 IPR009057 -
Alju09g1822 468 MobiDBLite consensus disorder prediction 337 355 - -
Alju09g1822 468 FunFam transcription factor MYB1R1 226 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1822 Alju-ChrAlju09 42056876 42063695 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju09g1822 Myb_DNA-binding 5.3e-11 CL0123