Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju09g1803 | ATGGAGAGGCACAAATGCAAGCTTTGCTCTCGAACGTTCGCTAATGGAAGAGCATTAGGTGGTCACATGAAGGCTCACTTGACCTCTCTTCCTCTTCCTCCTCCCAAGCCCCACCCTCTGATTACTTCCTCAACACCTTCCTTCTCTTATTCCTCTTCCGACGACGACGACCGAGAACAACAAGTTGAAGTAGTTCCGTCTTACAGAGAATTCGACGACAAGGCTTTGAGTTATGGTTTGAGGGAGAATCCAAGGAAAAATTTCAGGTTCTCAGATCCTGAGTTCTCTTTTGCGGTTGATGCTGGCTCCGTCGTCGTCGTCGTTCAAGATAGAGAAAGCGAGACCGAGTCAAAGAATAATCCGACTGGCCGGCGATCCAAGCGAAGCCGAAAATCCAGCGTCGGAGGAGCTATTCAGAAATTTCAAGTGACCAAGGCCAAGTCAAATTTGACGGAGTCGCCGCCGCTGACGGAGCCAGAACCGGTGAGCTCGGTTTCTGATACTTCACCGGATGAAGATGTTGCTATGTGTCTCATGATGCTTTCGAGGGACCGATGGATGAAAAACGACGTCGTGGAACAAGATCAAGTGGAGAGATCGGAGGAACCGGAAGAGATCAAGTTGAAGAGGAAGCATCAATCTGATGACACTAAGAAAACTTGTCGATCTTCACGCGCATTGGACACACACAATAGGACCTACTTTCCTGGAGAAGCAGAGACGAACAAAATTGCAGGTAACGATAAAATTTTCGAATGCCCATTCTGTTACAAAGTGTTTGGGTCAGGACAAGCACTCGGTGGTCACAAGAGATCCCACCTCCTACCATCTTCGTCGTCAACTGCTATCCACTCTGCTAAATGTTCCATAGATCTCAACCTGCCAGCTCCGGCAGAAGAAGATGATGAACTAAGTGTGGTTTCTGATGCGTAA | 933 | 0.4812 | MERHKCKLCSRTFANGRALGGHMKAHLTSLPLPPPKPHPLITSSTPSFSYSSSDDDDREQQVEVVPSYREFDDKALSYGLRENPRKNFRFSDPEFSFAVDAGSVVVVVQDRESETESKNNPTGRRSKRSRKSSVGGAIQKFQVTKAKSNLTESPPLTEPEPVSSVSDTSPDEDVAMCLMMLSRDRWMKNDVVEQDQVERSEEPEEIKLKRKHQSDDTKKTCRSSRALDTHNRTYFPGEAETNKIAGNDKIFECPFCYKVFGSGQALGGHKRSHLLPSSSSTAIHSAKCSIDLNLPAPAEEDDELSVVSDA | 310 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju09g1803 | 310 | MobiDBLite | consensus disorder prediction | 110 | 171 | - | - | |
| Alju09g1803 | 310 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 253 | 273 | IPR013087 | - | |
| Alju09g1803 | 310 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 4 | 31 | IPR013087 | - | |
| Alju09g1803 | 310 | MobiDBLite | consensus disorder prediction | 132 | 170 | - | - | |
| Alju09g1803 | 310 | Gene3D | Classic Zinc Finger | 181 | 280 | - | - | |
| Alju09g1803 | 310 | PANTHER | ZINC FINGER PROTEIN ZAT1-RELATED | 1 | 310 | IPR044303 | GO:0006355 | |
| Alju09g1803 | 310 | SMART | c2h2final6 | 251 | 273 | IPR013087 | - | |
| Alju09g1803 | 310 | SMART | c2h2final6 | 4 | 26 | IPR013087 | - | |
| Alju09g1803 | 310 | SUPERFAMILY | beta-beta-alpha zinc fingers | 3 | 273 | IPR036236 | - | |
| Alju09g1803 | 310 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 6 | 26 | IPR013087 | - | |
| Alju09g1803 | 310 | Pfam | C2H2-type zinc finger | 3 | 27 | - | - | |
| Alju09g1803 | 310 | Pfam | C2H2-type zinc finger | 251 | 273 | - | - | |
| Alju09g1803 | 310 | MobiDBLite | consensus disorder prediction | 29 | 63 | - | - | |
| Alju09g1803 | 310 | MobiDBLite | consensus disorder prediction | 193 | 225 | - | - | |
| Alju09g1803 | 310 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 251 | 273 | IPR013087 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju09g1803 | Alju-ChrAlju09 | 41898246 | 41899178 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju09g1803 | 2 | 307 | C2H2 Transcription Factor Family | AT1G02030 | 35.562 | 3.57e-38 | 134 |
Transcription factors information