Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1801 ATGGCTTCTTCTTTGTCCTTGTCATTGATTTTGGTTTCTGTTTTGTTATTTTTTCATGTAGAAACAGTGAGATGTACACCCTCCGACGATAACACCCCAAGTTCACCACCACCAGTGTCTTCCACAAACTCCTCATCGAAGCACCGTCACCGTTGGGTGGGCCCTATCGGTTACCGTCTAATCACCGTGGACGTGAACGGATCAGGGCAATTCAGATCCGTGCAAGCCGCCGTGGATGCTGTACCAGACAATAATGGAATGAACGTTGTCATTAATATTAGCGCTGGATGCTACGTAGAGAAGGTGGTGGTGCCGGCGACGAAACCCTACATAACGTTTCAGGGAGCGGGGAGGGACGTGACGGTGATAGAATGGCATGACAGAGCCAGCGACCCTGGTCCCAATGGACAACAGCTACGTACTTACAGAACTGCTTCTGTCACTGTCTTTGCCAACTATTTCTCTGCCAGGAATATCAGCTTTAAGAACACGGCGCCGGCGCCGATGCCGGGAATGGAGGGATGGCAAGCGGCGGCGTTTCGGATATCGGGGGACAAGGCATATTTCTCAGGATGCGGATTCTACGGCGCACAAGACACTCTTTGTGACGACGCGGGCCGCCATTATTTCAAGGACTGCTACATCGAGGGTTCCATTGATTTCATCTTCGGCAATGGCCGTTCCATGTACAAGGATTGTGTGGTGCACTCGATAGCGACGAAATTCGGTTCGATAGCAGCCCACAAGAGAAAACACGTGGACGAGAAGACGGGCTTCGCATTCGTACGGTGCCAGGTGACGGGTACGGGCCCACTCTATGTGGGCCGGGCCTTGGGGCAATACTCCAGAATCGTCTACGCTTATACGTATTTTGATGACATTGTTGCCCAAGGAGGTTGGGACGACTGGAACCATGTGGACAACAACAACAAGACGGTGTTCTTCGGAGTGTATAAGTGCCGGGGCCCAGGAGCTGCGGCGGCGCGTGGGGTGTCTTTAGCCCGTGAGCTTGACTTTGAATCTGCCCATCCATTTCTCGTTAAGAGCTTCGTCAATGGCAGACACTGGATCGCACCTTCTGATGCTTAG 1089 0.5243 MASSLSLSLILVSVLLFFHVETVRCTPSDDNTPSSPPPVSSTNSSSKHRHRWVGPIGYRLITVDVNGSGQFRSVQAAVDAVPDNNGMNVVINISAGCYVEKVVVPATKPYITFQGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFKNTAPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIEGSIDFIFGNGRSMYKDCVVHSIATKFGSIAAHKRKHVDEKTGFAFVRCQVTGTGPLYVGRALGQYSRIVYAYTYFDDIVAQGGWDDWNHVDNNNKTVFFGVYKCRGPGAAAARGVSLARELDFESAHPFLVKSFVNGRHWIAPSDA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1801 362 MobiDBLite consensus disorder prediction 26 49 - -
Alju09g1801 362 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 57 358 - -
Alju09g1801 362 ProSitePatterns Pectinesterase signature 2. 215 224 IPR033131 -
Alju09g1801 362 Gene3D - 59 361 IPR012334 -
Alju09g1801 362 Pfam Pectinesterase 61 353 IPR000070 GO:0030599|GO:0042545
Alju09g1801 362 FunFam Pectinesterase 57 359 - -
Alju09g1801 362 SUPERFAMILY Pectin lyase-like 59 359 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1801 Alju-ChrAlju09 41874760 41876888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1801 9 362 Carbohydrate Esterase AT5G47500 71.547 0.0 533