Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1789 ATGGATTCTCGCCGATCTGCTTCTTTCGTTAACAATGCGGCTATAGACATGCAGTTGCAACAAAAGGAACAGGGAAAAAGGGGAATTGACAGCTTAAATGGTTATCCTGGTAATGTTATCCTAACAGAAGCTTTTGGAGGAAGCCGGCAGGAATCTCTGGTGAAGTGGATAAATAGCGTGCTTCCTCACTTAAATCTACCCATAGAAACTTCAGAGGAGGAAGTAAGGGCATTGCTGAGGGATGGATCTGTATTGTGCAGCATTTTGGACAAGCTGATTCCGGGATCAGTGGATGTAGGAGGTTATTCTCTGGATGAGCAAGCGAACATTAGAAGGTTTCTACAGGCTATGGATGAGCTGGGATTGCCTGGATTTGATTCGTCAAGGCTAGAGCAGGGATCGATGGGGCACATGTTGCAATGTGTTGAGGTTCTGAAAACTCATTTTGCTTCAAATGTTAAGAGAGAAAATATCCAAAGTCTTTCCAGAAAGAGGTGGGATCAATCAGATCTAGCATACTTGGCCTATGGAAGTGGAGAGAGGCTAAAATTTTCAGGTGATTCAAATTTCGAACATGAAGTTGAGGGTTCAGTAACATCAGATAAAGAACTGGTACAGCTGAAACGAGGATTGCATGTGGATCTTTCTGATGATAAAATTATGGAGTTACTCAAATCAAACAGTTTAGATAATGCCTCGACTCAGTCACTTTTTAACATAGGAAATAGGATTATGGGGGATATCTTTGGAAGAAAGAATGGGGATGTGCCTCAACAAAACAATCTTTTCAAGGTTCGTGAGGGGAAGTACCAATCGAAAATAAATGCACTTGAAACCCTAGCAGCAGGGACAACTGAAGAGAATGAGTTTGCTCTTAAAGTTGAGAAAACTAAAATGGAGGAGAAAAACAAACTTGACGAGCAAGATGTTGCTCATTTAAAAGAAGAAAAAGTCCGTTGTGAAATTGAGATTTCTGCATTGAAGAAAGAATTGGAAATGGTCAAAAAAACACATGAAGAGCTCCGTGCGCAGTCAGAAGTACGTGCTGAAGAATGCAAATCCGAATATGTGAAGAGGATATGGGAACTAGAATGTGGTCTTGCTGATGCAAGGAATCAAGCCAATAAATTGGAGGCATTTATAGAATCTAAATCTCTTAAATGGAAGAACAAAGAGAATACCTATCAAAGTTTCATTAGTTACCAATTCGGAGCATTCAAGGAATTGAGAGCTGTGATGGAATGTCTAAAAGATGATGTGCTAAAAACCAGAAGAAGCTACTCAGAAGAATTCAAGTATTTGGGGATGAAGCTCAAAATTCTAGCTGAAGCTGCCGAAAATTATCACTTAGTTCTTACAGAAAATCGGAAATTATATAATGAAGTTCAAGACTTGAAAGGAAATATCCGGGTGTATTGTCGGATAAGACCCTTTCTTCCCGGGCAAAGTCAAAACCAGACAACCATTGAATTGATTGGTGATAATGGAGAATTAGTTGTCAGCAATCCTCTCAAACAAGGAAAAGAGAGTCGTAAACTTTTTAAATTTAACAAGGTTTTTGTTCCAACAGCAAGTCAAGAAGAAGTATTCATGGACACACAACCACTAATTCGCTCTGTACTTGATGGGTACAATGTTTGCATATTTGCTTATGGTCAAACTGGCTCAGGAAAGACATATACAATGGAAAGCCAATGTAAGTATTATTTCCTTGACTTGCATACACTTGGGATTTGGAATTCTTCCCAACCAAATGGGTTGGTTGTTCCTGATGCAAGCTTGCATACTGTGAATTCAATGACGGATGTGCTGGAGTTGATGAACATTGGACTAATGAATCGAGTAACTGGTTCCACAGCCTTAAATGAAAGAAGTAGCAGATCACATAGTGTTCTTACTGTTCATGTTCGTGGCACGGATTTGGAGACCAACACTTTATTGCGTGGATGTCTACATCTTGTAGATCTTGCGGGGAGTGAGAGAGTAGAGCGTTCTGAAGCAACAGGAGATAGGCTTAAGGAGGCTCAGCATATAAATAAATCACTATCAGCACTTGGCGATGTGATTTTTGCTCTAGCACAAAAGAGTTCACATGTTCCTTATAGAAATAGTAAATTGACTCAACTTCTTCAAAGTTCGTTAGGTGGTCAAGCAAAAACCCTCATGTTTGTACAGCTTAACCCTGACACTGCTTCATATTCTGAAACGATAAGCACCTTGAAGTTTGCGGTGAGGGTTTCAGGTGTTGAGCTAGGTGCTGCTCGTAGTAATAGAGAGGGAAGGGATGTCAAAGAACTCTTAGAGCAGGTAGCATCTCTCAAAGATGCACTTACAAGGAAGGATGAAGAGATTGAGCGGTTGCAGCAGCTCAAGGCTAATCTCAACGTTGCCAAGCGTGGGATGATGAGGTATGGGTCATCATCTCCAAGGAGACATTCCATTGGAGGAGCTTCGAGGCATAGCACAAGACTTTCTGGAGCTGGGGCCTTGCGAGCAGCTGAAAAAACAGCTTCTGACATGGACAACTGCTCGGAGTATAGTGATAAGCATTCAGAAGCTGGTTCTCATCAGTCCATGGATGATCTCAGGAACAGGCCCAGCTTCCCACTGGTCAAATCATCCAAAGAAGATACAAGCCAGAATGTCAATGACGACATTGATCTCTTAGGATTTGGAGATGCAGATTCTGAAGAGAGATTAAGTGATATATCTGATGGTGGCCTTTCAATGGGAACAGAAACTGATGGTTCTATCTGCAGCATTGTGGAGTACGCTCTTTTCCCTGAAGCGGAGAAGGAGAAGCCAGCTGAAATTTCCCCAAGTAAGAGCACAACAATTGACAACCTGTCAGCTGTAAACAAAGAAATATCCACTTTGGCGTCCAAAATTCCCAAAGCCGCGGAAGTTCTACAAAAAGGACCAATAAAATCTTCCAGGTTATCAATGAACAGAAGTTCCTCAAAGATTTCTTCAGGTCGAGGAAACGCTCGGTTTGTTGAGGTACTCAATGCTTATCGGGTTTCCTCCAATTCCTCTTTAAATTCATCTTGCTTTGATGCATATGTATGCTCCTTGCTTGTCACTTCAGATCTTCGATTCTGCAAAACTAGTTCTTTTACTGCTTTCAAAGAGGCATGGTTGATTTTTTCTGTTATTTCAACGTTTAAGATGGGGTGCGAGTTTTCCAAGTTCTCAGCATGCTGCTCGGGTACAGAGCCAAGTGGTCCAGTTCCTGAAGCAAATATTGACGAAAATGAAGAGAATAGTGAGGCCACTGATGTGCCACCATTTCAAGAATATACAATTGATCAGCTTAGGAAGGCTACTTCTGGATTTGCCATCGAGAATATAGTTTCTGAGCATGGAGAAAAGGCTCCAAATGTGGTTTATAAAGGGAAACTAGAAAATCAAAAGCGAATTGCTGTCAAACGGTTCAATAGATCAGCCTGGCCTGATGCACGACAATTTTCAGAAGAAGCCAGGGCTGTTGGACATCTAAGGAACGAAAGATTGGTAAATTTACTTGGATGTTGCTGTGATGGTGATGAGAGGTTACTTATTGCAGAATATATGCCTAATGATACTTTGGCAAAGCACTTGTTCCACTGGGAAACTCAGCCCATGAAATGGGCAATGCGACTAAGAGTTGCTTTATACCTTGCCCAAGCGCTAGAATATTGTACTAGCAAAGGACGCGCACTATATCATGATCTAAATGCTTATAGAGTACTTTTTGATGATGAAGGAAATCCTAGACTCTCATGCTTTGGCTTGATGAAAAACAGTCGGGATGGTAAAAGTTATAGTACAAACCTGGCATTTACTCCGCCTGAGTATTTAAGGACAGGTAGAGTTACTCCTGAAAGTGTAACATACAGTTTTGGAACCCTTTTGCTTGACCTTCTTAGTGGAAAGCATATTCCTCCAAGCCATGCACTTGACCTGATTCGAGACAGGAACCTTCAGATGCTGACAGATTCTTGTCTAGAAGGACAATTTTCAAATGATGAGGGGACTGAATTAGTGCGCTTGGCCTCACGATGTTTACAATCAGAACCCCGGGAGCGTCCTTATCCAAAGTCATTGGTTTCTGCTTTAATAGATCTGCAGAAGGATTCTGAGGTTCCTTCTCATGTTTTGATGGGTATACCACATGGCACAAATGCTTTACCACTTTCACCTTTTGGTGAGGCATGTCTAAGAATGGATTTGACTGCCATCCATGAGGTCCTTGAAAAACTTGGGTATAAAGATGATGAGGGTGCTGCTACTGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAAGAAACACTGAACTCAAAGAAGAAGGGTGATTCTGCTTTTCGTCATAAAGACTTCAAAGCTGCAATTGATAGCTATACTCAGTTCATTGATGTTGGAACTATGGTTTCTCCAACTGTTTATGCACGCCGCAGTTTGTCTTATCTCATGAACAACATGCCAGAAGAAGCACTGAAGGATGCATTGCAGGCACAAACAGTTTCCCCTGTTTGGCATATTGCTTCCTACTTACAAGCAGTGGCACTTCTTGCATTGGGCAGGGAAAATGAGGCCCAGGTGGCACTTAAAGAGGCTTCTTCACTTGAAAGTAAAAAGAACACAAATTAA 4632 0.4147 MDSRRSASFVNNAAIDMQLQQKEQGKRGIDSLNGYPGNVILTEAFGGSRQESLVKWINSVLPHLNLPIETSEEEVRALLRDGSVLCSILDKLIPGSVDVGGYSLDEQANIRRFLQAMDELGLPGFDSSRLEQGSMGHMLQCVEVLKTHFASNVKRENIQSLSRKRWDQSDLAYLAYGSGERLKFSGDSNFEHEVEGSVTSDKELVQLKRGLHVDLSDDKIMELLKSNSLDNASTQSLFNIGNRIMGDIFGRKNGDVPQQNNLFKVREGKYQSKINALETLAAGTTEENEFALKVEKTKMEEKNKLDEQDVAHLKEEKVRCEIEISALKKELEMVKKTHEELRAQSEVRAEECKSEYVKRIWELECGLADARNQANKLEAFIESKSLKWKNKENTYQSFISYQFGAFKELRAVMECLKDDVLKTRRSYSEEFKYLGMKLKILAEAAENYHLVLTENRKLYNEVQDLKGNIRVYCRIRPFLPGQSQNQTTIELIGDNGELVVSNPLKQGKESRKLFKFNKVFVPTASQEEVFMDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMESQCKYYFLDLHTLGIWNSSQPNGLVVPDASLHTVNSMTDVLELMNIGLMNRVTGSTALNERSSRSHSVLTVHVRGTDLETNTLLRGCLHLVDLAGSERVERSEATGDRLKEAQHINKSLSALGDVIFALAQKSSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDTASYSETISTLKFAVRVSGVELGAARSNREGRDVKELLEQVASLKDALTRKDEEIERLQQLKANLNVAKRGMMRYGSSSPRRHSIGGASRHSTRLSGAGALRAAEKTASDMDNCSEYSDKHSEAGSHQSMDDLRNRPSFPLVKSSKEDTSQNVNDDIDLLGFGDADSEERLSDISDGGLSMGTETDGSICSIVEYALFPEAEKEKPAEISPSKSTTIDNLSAVNKEISTLASKIPKAAEVLQKGPIKSSRLSMNRSSSKISSGRGNARFVEVLNAYRVSSNSSLNSSCFDAYVCSLLVTSDLRFCKTSSFTAFKEAWLIFSVISTFKMGCEFSKFSACCSGTEPSGPVPEANIDENEENSEATDVPPFQEYTIDQLRKATSGFAIENIVSEHGEKAPNVVYKGKLENQKRIAVKRFNRSAWPDARQFSEEARAVGHLRNERLVNLLGCCCDGDERLLIAEYMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYHDLNAYRVLFDDEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDEGTELVRLASRCLQSEPRERPYPKSLVSALIDLQKDSEVPSHVLMGIPHGTNALPLSPFGEACLRMDLTAIHEVLEKLGYKDDEGAATELSFQMWTNQMQETLNSKKKGDSAFRHKDFKAAIDSYTQFIDVGTMVSPTVYARRSLSYLMNNMPEEALKDALQAQTVSPVWHIASYLQAVALLALGRENEAQVALKEASSLESKKNTN 1543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1789 1543 ProSiteProfiles Calponin homology (CH) domain profile. 47 150 IPR001715 GO:0005515
Alju09g1789 1543 SUPERFAMILY TPR-like 1442 1538 IPR011990 GO:0005515
Alju09g1789 1543 Gene3D Kinesin motor domain 579 779 IPR036961 -
Alju09g1789 1543 FunFam probable serine/threonine-protein kinase At4g35230 1436 1543 - -
Alju09g1789 1543 FunFam probable serine/threonine-protein kinase At4g35230 1087 1190 - -
Alju09g1789 1543 SUPERFAMILY Calponin-homology domain, CH-domain 48 149 IPR036872 -
Alju09g1789 1543 Gene3D Kinesin motor domain 410 578 IPR036961 -
Alju09g1789 1543 Gene3D Tetratricopeptide repeat domain 1432 1543 IPR011990 GO:0005515
Alju09g1789 1543 Coils Coil 296 344 - -
Alju09g1789 1543 FunFam Kinesin-related protein3 586 791 - -
Alju09g1789 1543 SUPERFAMILY Protein kinase-like (PK-like) 1087 1375 IPR011009 -
Alju09g1789 1543 Pfam Calponin homology (CH) domain 48 149 IPR001715 GO:0005515
Alju09g1789 1543 ProSiteProfiles Kinesin motor domain profile. 468 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju09g1789 1543 Gene3D - 45 153 IPR036872 -
Alju09g1789 1543 Pfam Protein tyrosine and serine/threonine kinase 1128 1365 IPR001245 GO:0004672|GO:0006468
Alju09g1789 1543 SMART ch_5 49 148 IPR001715 GO:0005515
Alju09g1789 1543 MobiDBLite consensus disorder prediction 801 884 - -
Alju09g1789 1543 Pfam Kinesin motor domain 579 747 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju09g1789 1543 Gene3D Phosphorylase Kinase; domain 1 1085 1190 - -
Alju09g1789 1543 Pfam Microtubule binding 453 565 IPR031852 GO:0008017
Alju09g1789 1543 MobiDBLite consensus disorder prediction 841 859 - -
Alju09g1789 1543 FunFam probable serine/threonine-protein kinase At5g41260 1192 1383 - -
Alju09g1789 1543 PRINTS Kinesin heavy chain signature 543 564 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju09g1789 1543 PRINTS Kinesin heavy chain signature 650 668 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju09g1789 1543 PRINTS Kinesin heavy chain signature 699 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju09g1789 1543 PRINTS Kinesin heavy chain signature 619 636 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Alju09g1789 1543 Coils Coil 763 800 - -
Alju09g1789 1543 Gene3D Transferase(Phosphotransferase) domain 1 1192 1383 - -
Alju09g1789 1543 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 468 787 IPR027417 -
Alju09g1789 1543 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1072 1541 IPR045845 GO:0004672|GO:0009742
Alju09g1789 1543 ProSiteProfiles Protein kinase domain profile. 1115 1381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1789 1543 SMART kinesin_4 466 757 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1789 Alju-ChrAlju09 41770709 41791460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1789 348 783 Calmodulin-binding Proteins AT5G65930 34.927 2.55e-62 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Alju09g1789 PK_Tyr_Ser-Thr 1.3e-25 CL0016