Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1767 ATGTCATCATCCTCTTCTACTACCTTATCGCTGGACCACCTCCCTCCTTCCGAGCAGCTTTGTTATGTCCACTGCAACATTTGTGACACTGTCCTCGCTGTGAGTGTTCCTTGCACCAGCTTGTTCAAGACGGTGACGGTGCGATGCGGCCATTGCACCAATCTGCTGCCAGTTAACGTTAACGTTAACGTGCGTGGATTGCTTCTTCCTTCAGCAAACCAATTTCACTTGGGTCACTCTTTCTACTCTCCATCTCACAATCTTCTGGAGGAGAGACCAAACCCATCCCCAAATTTCTTAATCGATCAGACCAACTCTTCCAATGATTTCTCTACAGCTTCAAGGACAACACCTAGTGAGCTTCCACGCCCACCCCTCATCAATAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCCGCCTACAACCGATTCATTAAGGAGGAGATCCAACGCATCAAGTCTATCAATCCCGATATAACCCACAGAGAAGCCTTCAGCGCAGCTGCCAAGAACTGGGCCCATTTCCCTCACATTCACTTTGGCCTCATGCCGGATCAGACTATGAAGAAGACAAATGTGCGCCAGCAGGAAGGAGAGGACGTTGTCCATATGAAAGATAATGGGTTTTTTGCTTCTGCAAATGTTGGTGTTTCTCCCTACTAG 663 0.4857 MSSSSSTTLSLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNVNVNVRGLLLPSANQFHLGHSFYSPSHNLLEERPNPSPNFLIDQTNSSNDFSTASRTTPSELPRPPLINRPPEKRQRVPSAYNRFIKEEIQRIKSINPDITHREAFSAAAKNWAHFPHIHFGLMPDQTMKKTNVRQQEGEDVVHMKDNGFFASANVGVSPY 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1767 220 Pfam YABBY protein 16 182 IPR006780 GO:0007275
Alju09g1767 220 MobiDBLite consensus disorder prediction 92 121 - -
Alju09g1767 220 PANTHER PROTEIN YABBY 6-RELATED 1 194 IPR006780 GO:0007275
Alju09g1767 220 CDD HMG-box_SF 136 172 - -
Alju09g1767 220 MobiDBLite consensus disorder prediction 92 139 - -
Alju09g1767 220 Gene3D High mobility group box domain 127 199 IPR036910 -
Alju09g1767 220 FunFam Axial regulator YABBY 127 198 - -
Alju09g1767 220 SUPERFAMILY HMG-box 125 175 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1767 Alju-ChrAlju09 41516259 41518461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1767 27 218 C2C2-YABBY Transcription Factor Family AT4G00180 58.962 1.77e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Alju09g1767 YABBY 5.4e-69 CL0114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1767 09 41516259 41518461 Alju09g1767 09 41516259 41518461 ECH