Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1766 ATGAATACGTTTTCACATGTTCCTCCAGGCTTCCGGTTCCACCCCACAGATGAAGAACTGGTTGATTATTACCTAAGAAAAAAGCTAGCCTCCAAAAGGATTGACCTAGATGTTATTAAAGATGTGGATCTCTATAAAATTGAGCCATGGGATCTTCAAGAACTATGCAAAATAGGAGCGGAAGAACAAAACGAGTGGTATTTCTTCAGCCACAAAGACAAGAAGTACCCAACAGGAACTCGCACAAATAGAGCCACAAAAGCAGGATTCTGGAAAGCCACAGGAAGAGACAAGGCAATCTACCGTAGGCATTGCCTTATTGGCATGAGAAAGACTCTTGTTTACTACAAGGGACGAGCCCCAAACGGACAGAAGTCTGACTGGATCATGCACGAGTACCGACTTGAAACTAATGAAAATGCAACTACTCAGGAAGAAGGTTGGGTTGTTTGTCGAGTGTTCAAGAAGAAAATGACAAGCGTGCGGAGAGTGGGGGAGTATGAATCAGCATGCTGGTTTGAGGACCAAGTATCGTTGATGCAAGAACTTGAATCTGCAAGACCAATATCTCAACCTTATGCATCTAATTACCACCACCACCATCAGTACTACGTACCTTGCAAGCAGGAACTTCATCAATCGCAATATAACGTAACCCTTCCCCATGAAGTTTTCCTTCAGCTTCCTCAACTTGAAAGCCCCAAAGTTCCTTACTCGGCAGCAGCCAGTTTGAGCTGCAATAATTCAACGGTCCCTGCTTATGCCTATGACAGCAACAACAACAACAATAATAATAATGGAAGTAGCTTGCACTCGCCCAATTCACTCACTCAGGAAGAGAACATAGCTTGTGGAAACAATGATCATCAAGTGACGACTGATTGGCGAGTTCTTGATAAATTTGTGGCTTCTCAACTCAGCAGTCACCACCAGCAAGTTGATGCTTGCAAAGAAGTGCTCCGTGTGGATGAACCTATCACTATTCAGGCAAACGATCGTCAACTTAAAAGGCCAGAAATTGGGCAGCAGGAATATGCCTCCACATCCACCTCAAGTTGCCAGATTGACCTGTGGAACTGA 1080 0.4417 MNTFSHVPPGFRFHPTDEELVDYYLRKKLASKRIDLDVIKDVDLYKIEPWDLQELCKIGAEEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYRRHCLIGMRKTLVYYKGRAPNGQKSDWIMHEYRLETNENATTQEEGWVVCRVFKKKMTSVRRVGEYESACWFEDQVSLMQELESARPISQPYASNYHHHHQYYVPCKQELHQSQYNVTLPHEVFLQLPQLESPKVPYSAAASLSCNNSTVPAYAYDSNNNNNNNNGSSLHSPNSLTQEENIACGNNDHQVTTDWRVLDKFVASQLSSHHQQVDACKEVLRVDEPITIQANDRQLKRPEIGQQEYASTSTSSCQIDLWN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1766 359 MobiDBLite consensus disorder prediction 339 359 - -
Alju09g1766 359 FunFam NAC domain-containing protein 16 160 - -
Alju09g1766 359 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Alju09g1766 359 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 263 - -
Alju09g1766 359 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Alju09g1766 359 MobiDBLite consensus disorder prediction 341 359 - -
Alju09g1766 359 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Alju09g1766 359 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1766 Alju-ChrAlju09 41504817 41506380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1766 1 357 NAC Transcription Factor Family AT1G62700 54.087 9.97e-135 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju09g1766 NAM 1.8e-37 No_clan