Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1744 ATGCATGAGTTGTTAAGCTTTTTAAATATGGAATCAAGGGATGGAATTAGCAGCGCAGTCACGGTGGTGGGATCAGATGATCCGTCGGAGTACCATGTAGCTCCCCGGACCGAGAACCCGGCAGCCACCGGCGGATCGACGACGACGTCCGCGCCGGCTCCGGCGGCTCAAGGGAGTGCTCCTCCGAGGCAGGCGGCGGCGGCGGCGGGAGGCACGCCGGCAACCATGACGATGCCGGGAAAGAAGAAAAGAGGGCGACCGAGAAAGTACGGACCGGACGGGTCGGTGACGATGGCTCTATCTCCTAAACCAATATCTTCTTCGGCTCCACCACAAGTCATCGATTTCTCTGCAGATAAGCGCGGGAAAGTTCGTCCAGCTAGTTCGGTCAGCAAATCCAAATTCGAGGTCGAAAATATAGGTGAATGGGTTGCATGCTCCGTAGGTGCTAATTTTACACCCCATATAATCACTGTTAATGCTGGGGAGGATGTTACTATGAAGATAATATCATTTTCTCAGCAAGGACCTCGAGCTATATGTATTCTTTCTGCAAATGGTGTCATATCAAGTGTCACACTTCGTCAACCTGATTCTTCTGGCGGCACATTGACCTATGAGGGACGTTTTGAAATTCTGTCGTTGTCTGGGTCCTTCATGCCAAGTGAAAGTGGGGGAACACGGAGCAGATCCGGCGGCATGAGCGTTTCTTTAGCAAGTCCTGATGGTCGTGTTGTAGGTGGTGGAGTGGCAGGTCTATTAGTAGCAGCAAGTCCTGTGCAGGTAGTGGTAGGAAGCTTTCTGGCTGGAAACCAGCATGAGCAAAAGCCAAAGAAACAGAAAATTGAGGTGATATCCACAGCCATACCAACTGCTGTTGTTCCCTTGTCTAGTGTTACCGATCCCGTCCCTCTCCTCACCTCTCCGTCTTCCTTTCGCGGCGAAAGTTGGTCTGCTATCCCGGCGGATAACAGGAATAACACCACCACCAACAATAATAGTAATAGTAATAATAATAATAAGCCGACTGATATTAATGTGTCAGTGTCTGGAGGGCACGACCCTGATTATCTTCGCCAGGAAGTTTCTTTAAAACGTGGAAACAGAAATTCTTGGCAATTTCTTGGTCATCATTCTAACTTGCTTATTCTGCTTACACCCCATATGAAGCTTCTTCAGAAATTATAG 1188 0.4924 MHELLSFLNMESRDGISSAVTVVGSDDPSEYHVAPRTENPAATGGSTTTSAPAPAAQGSAPPRQAAAAAGGTPATMTMPGKKKRGRPRKYGPDGSVTMALSPKPISSSAPPQVIDFSADKRGKVRPASSVSKSKFEVENIGEWVACSVGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPKKQKIEVISTAIPTAVVPLSSVTDPVPLLTSPSSFRGESWSAIPADNRNNTTTNNNSNSNNNNKPTDINVSVSGGHDPDYLRQEVSLKRGNRNSWQFLGHHSNLLILLTPHMKLLQKL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1744 395 MobiDBLite consensus disorder prediction 314 352 - -
Alju09g1744 395 SUPERFAMILY AF0104/ALDC/Ptd012-like 151 271 - -
Alju09g1744 395 MobiDBLite consensus disorder prediction 314 347 - -
Alju09g1744 395 Gene3D - 154 287 - -
Alju09g1744 395 MobiDBLite consensus disorder prediction 20 112 - -
Alju09g1744 395 MobiDBLite consensus disorder prediction 40 55 - -
Alju09g1744 395 Pfam Plants and Prokaryotes Conserved (PCC) domain 154 267 IPR005175 -
Alju09g1744 395 CDD DUF296 153 244 IPR005175 -
Alju09g1744 395 ProSiteProfiles PPC domain profile profile. 149 288 IPR005175 -
Alju09g1744 395 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 49 337 IPR039605 GO:0003680
Alju09g1744 395 FunFam AT-hook motif nuclear-localized protein 1-like 154 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1744 Alju-ChrAlju09 41323140 41328729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1744 8 350 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 59.511 1.23e-125 365