Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1738 ATGGATCCAATAGCAGGGCATGGGCATGGGCATGGGCATGGGCAGTCACTTCCTCCACCATTCCATATGCACCTGCAGCAGCAATCTCATCAATTTCAGTCACTGCACCAAAACACAGAAGACGAACAAAGCGCAAGTAGCAGTGGCCTAAACCTCACAGCCGGCAAGAGAGAACGCGAAGAACAAACCAACAACAACAACATCAATACTGATCAAGGTAATAATATGAACAACGGAGTAGAAGGTGGAGAAATCACGAGAAGGTCTCGTGGAAGACCTTCCGGATCCAAGAACAAACTAAAACCACCCATCATCATATCCCGAGACAGTGCTAATGCCCTTAGAACCCACGTCATGGAGATCGCTGACGCTTGTGACATCGTCGAGAGCGTCTCTACCTTCTCCCGGCGCCGCCAGAGAGGCGTTTGCATTATGAGCGGCACCGGCACCGTCGCTAATGTTACCTTGAGGCAACCAGCTTCTTCCGGCGCTGTTGTTTCTCTTCATGGAAGGTTTGAAATCTTGTCGCTCGCCGGCTCCTTCTTGCCGCCACCGGCTCCCCCGGCCGCGTCCTGTTTGACCATATATTTGGCTGGCGGACAAGGTCAGGTGGTCGGGGGAACCGTGGTGGGCACGCTTATGGCTTCGGGACCGGTGGTGATCATGGCGGCGTCGTTTAGCAACGCTGCTTATGAGAGGCTTCCTTTGGAGGAGGAAGACCCGTCGGCGGCGATTCAAGGCCCCGGAATCGGGTCACCGGGAGGAGTTGGTCAGCCGCAGCAACAAATAATAGGGGACGCAACAGGTCCACTCATGCATGCTTTGCCTCCTAATCTTGTCAATTCTATGCAGATGCCTTCATCTGATCAGCCTTTCTGGGCTCCCGCTCGTCCTCCTTTCGGATGA 906 0.5408 MDPIAGHGHGHGHGQSLPPPFHMHLQQQSHQFQSLHQNTEDEQSASSSGLNLTAGKREREEQTNNNNINTDQGNNMNNGVEGGEITRRSRGRPSGSKNKLKPPIIISRDSANALRTHVMEIADACDIVESVSTFSRRRQRGVCIMSGTGTVANVTLRQPASSGAVVSLHGRFEILSLAGSFLPPPAPPAASCLTIYLAGGQGQVVGGTVVGTLMASGPVVIMAASFSNAAYERLPLEEEDPSAAIQGPGIGSPGGVGQPQQQIIGDATGPLMHALPPNLVNSMQMPSSDQPFWAPARPPFG 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1738 301 CDD DUF296 115 182 IPR005175 -
Alju09g1738 301 MobiDBLite consensus disorder prediction 21 53 - -
Alju09g1738 301 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 43 294 IPR014476 GO:0003680
Alju09g1738 301 MobiDBLite consensus disorder prediction 1 103 - -
Alju09g1738 301 FunFam AT-hook motif nuclear-localized protein 114 241 - -
Alju09g1738 301 Pfam Plants and Prokaryotes Conserved (PCC) domain 115 228 IPR005175 -
Alju09g1738 301 ProSiteProfiles PPC domain profile profile. 111 248 IPR005175 -
Alju09g1738 301 SUPERFAMILY AF0104/ALDC/Ptd012-like 111 240 - -
Alju09g1738 301 PIRSF ESCAROLA 22 300 IPR014476 GO:0003680
Alju09g1738 301 Gene3D - 114 242 - -
Alju09g1738 301 MobiDBLite consensus disorder prediction 65 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1738 Alju-ChrAlju09 41246535 41247440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1738 1 300 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 51.622 3.66e-77 236