Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1697 ATGAGGCGTTGCCAGTTAATGATATTTCATAGCCTCCTTCCGTTACATCGATCTGATTTCCCTATTCGTTGCCGGTTTTCTCCATTCTCTTCCCGATTTCTTCAAATGAGGTCGTCTCAGGAGCATGAGATGGATCAGGACGACGATGGCGGAACCTCCGACCTCAGCACCAGCGCCGGCGATCCTGTGGCCATCAACACAGACAAAAACAATGGACTTCCCAAAGAACCTGTCTCGGACGATCCCTTGGCTTTCCAGGTCTTTCCGTTGAAGGAGGAGCCTGTTGATTCGGACTCACCGTCAGACCAGGAACAAAAATCGCAGCCTTCCTCGTCGGCTCCGATTGGAGTTGTTCCTGTCGCGATGCAGATGCAAATGCCCCTAACTATGCCCATGCCCACGCCGGTCGCTACCGCGAGACGCTCCTCCACCAAGGACCGCCACACGAAGGTGGAAGGCCGTGGACGTAGGATCCGAATACCCGCAACTTGCGCGGCTCGGATCTTTCAGCTGACTCGGGAGTTAGGTCATAAGTCTGATGGCGAAACCGTGAGGTGGCTCCTCGAACACGCGGAGCAGGCCATCATCGAGGCCACCGGCACAGGCACCGTCCCAGCCATCGCTGTCTCCGTCGGGGGAACTCTGAAGATTCCTACAACGTCTAGCGCCCACGGTAATCCGGACTCGGAACTCAGGAAGAAGCGGAAAAGGCCGTCCAATAGTGAGTTTGTGGACGTGAGTGAAGCCGTTTCACAATCGTCCGGTTTGGCCCCGGTTCAACCGGCTCTTCCTCAGGGCCTTGTGCCTGTTTGGGCAGTGGGCAACACTAATATGATGATCCCGGCGAACGCCTTTTGGATGATCCCTCCAGCGACAACGGCGACGCCAGTGGGCGGAAGTCCGGGATCGTCAAACCAACAACCTCATATATGGACTTTGTCGCCGACGGTAACGCCCGTATTCAACGTGTCCGCCAGACCCGTATCATCTTTGATGACAACAACAAATACCTCGAGCGGCATAGAAGCGTCGCCGGCTGGATGCAACAATTCGTCTAACTCAGCGGCGGTGAGCACGAGCACGGTGGGGCCAAGGGCGGCGAAGAAATCAGCGATGGCACCGAGCGTGGCGACGGGCAGCAGTAGTAGCAGCGGGAGCAAGGCGCAGATGTTGAGGGATTTTTCATTGGAGATTTACGATAAGCAAGAGTTACAGTTGATGGGGCGATCAGGGAACAAGCAAGCGGGGAAGGAAGAAAGTAGAAAGAAGCTAACAGGGACGGTGAGAGAGAGAGAGATTGAGGAAGGAGAAATAAGAGGATAG 1323 0.554 MRRCQLMIFHSLLPLHRSDFPIRCRFSPFSSRFLQMRSSQEHEMDQDDDGGTSDLSTSAGDPVAINTDKNNGLPKEPVSDDPLAFQVFPLKEEPVDSDSPSDQEQKSQPSSSAPIGVVPVAMQMQMPLTMPMPTPVATARRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTTSSAHGNPDSELRKKRKRPSNSEFVDVSEAVSQSSGLAPVQPALPQGLVPVWAVGNTNMMIPANAFWMIPPATTATPVGGSPGSSNQQPHIWTLSPTVTPVFNVSARPVSSLMTTTNTSSGIEASPAGCNNSSNSAAVSTSTVGPRAAKKSAMAPSVATGSSSSSGSKAQMLRDFSLEIYDKQELQLMGRSGNKQAGKEESRKKLTGTVREREIEEGEIRG 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1697 440 MobiDBLite consensus disorder prediction 134 153 - -
Alju09g1697 440 MobiDBLite consensus disorder prediction 405 440 - -
Alju09g1697 440 MobiDBLite consensus disorder prediction 227 242 - -
Alju09g1697 440 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 99 405 IPR005333 GO:0003700
Alju09g1697 440 MobiDBLite consensus disorder prediction 334 388 - -
Alju09g1697 440 MobiDBLite consensus disorder prediction 51 65 - -
Alju09g1697 440 ProSiteProfiles TCP domain profile. 144 198 IPR017887 -
Alju09g1697 440 Pfam TCP family transcription factor 143 223 IPR017887 -
Alju09g1697 440 MobiDBLite consensus disorder prediction 414 440 - -
Alju09g1697 440 MobiDBLite consensus disorder prediction 93 117 - -
Alju09g1697 440 MobiDBLite consensus disorder prediction 374 388 - -
Alju09g1697 440 MobiDBLite consensus disorder prediction 334 365 - -
Alju09g1697 440 MobiDBLite consensus disorder prediction 217 247 - -
Alju09g1697 440 MobiDBLite consensus disorder prediction 37 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1697 Alju-ChrAlju09 40826352 40829749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1697 140 412 TCP Transcription Factor Family AT2G45680 48.675 2.12e-70 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju09g1697 TCP 5.4e-28 No_clan