Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1670 ATGGATAGTTTTGAGCTTGCCTTACAGTTTGGCATCTCTGTCATGGCCATAGCTTGCCCTTGTGCTCTAGGTCTAGCCACACCAACTGCTGTTATGGTGCAATGCATTGTCTTCGACAAGACTGGTACTCTCACCATTGGGAAGCTTGTGGTTGTAAACACTAAACTGTTGATTAATATGGTCCTCCAAGAATTCTATGAACTTGTAGCAGGAGCTGAGGTGAATAGTGAGCATCCATTGGCCAAGGCAATTGTTGAGTATGCCAAGAAATTCAAAGATGAAGAGAACCCTGCTTGGCCTAAAGCACGAGATTTTGTCTCCAAACCTGGCCATGGAGTGAAGGCCATTGTTCAAAACAAGGAAATAATTGTGGGTAACAAGAGCTTGTTGGCTGACCATAATATTGCAGTTCCAGCGGAGGCAGAGGATATACTGGCTGAGGCTGAGGGGATGGCTCAAACTGGTATTTTGGTAACGATTAATAGGGATGTGGCTGGAGTTATAGCAGTATATGATCCACTGAAACCAGGTGCTCAAGAAGTGATCTTAGTTCTCAAGTCCATGAACATCAAAAGCATCGTAGTAACTGGTGACAACCGGGGAACTGCTAATTCCAGAACAAGGGAAGTTGGGATTGATGAAGTCTTTGCTGAAACTAAACCAGAGCAGAAAGCAGAGAAGGTGAAGGAATTGCAGGCTGATGGATATACAGTGGCAATGGTTGGGGATGGTATCAATGATTCACCAGCACTTGTAGCAGCAAATGTGGGAATGGCGATTGGTGCAAGCACAGGTATAGCTACTGAGGCAGCTGACATTGTTCTGATGAAGAGCAACTTGGAGGATGTGATAACTGCCATTGATCTTTACAGAAGAACATTTTTCCATATCCGTCTCAATTACATTTTGGCTTTGGGTTATAATCTTCTTGGCATTCCAATCGCTGCCGCAGTTCTTTTCCCTTTCACAGGATTCCGATTGCCGCCTTGGATTGTTGCAGCCTCATCTGTTAGTGTTGTTTGTTGCTCTTTATTGCTGATATATTACAGGAGGCCTAGGAAACTGGATAAGCCTGAGATTCGGGGCATTAGCATAGAATGA 1101 0.4432 MDSFELALQFGISVMAIACPCALGLATPTAVMVQCIVFDKTGTLTIGKLVVVNTKLLINMVLQEFYELVAGAEVNSEHPLAKAIVEYAKKFKDEENPAWPKARDFVSKPGHGVKAIVQNKEIIVGNKSLLADHNIAVPAEAEDILAEAEGMAQTGILVTINRDVAGVIAVYDPLKPGAQEVILVLKSMNIKSIVVTGDNRGTANSRTREVGIDEVFAETKPEQKAEKVKELQADGYTVAMVGDGINDSPALVAANVGMAIGASTGIATEAADIVLMKSNLEDVITAIDLYRRTFFHIRLNYILALGYNLLGIPIAAAVLFPFTGFRLPPWIVAASSVSVVCCSLLLIYYRRPRKLDKPEIRGISIE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1670 366 PRINTS H+-transporting ATPase (proton pump) signature 241 257 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju09g1670 366 PRINTS H+-transporting ATPase (proton pump) signature 272 297 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju09g1670 366 PRINTS H+-transporting ATPase (proton pump) signature 213 229 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju09g1670 366 SFLD p-type atpase 27 292 IPR044492 -
Alju09g1670 366 SUPERFAMILY HAD-like 36 339 IPR036412 -
Alju09g1670 366 Gene3D - 44 121 IPR023299 GO:0000166
Alju09g1670 366 Gene3D - 122 172 IPR023299 GO:0000166
Alju09g1670 366 FunFam Probable copper-transporting ATPase HMA5 133 298 - -
Alju09g1670 366 ProSitePatterns E1-E2 ATPases phosphorylation site. 39 45 IPR018303 -
Alju09g1670 366 Gene3D - 24 298 IPR023214 -
Alju09g1670 366 Pfam haloacid dehalogenase-like hydrolase 34 255 - -
Alju09g1670 366 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 33 359 - -
Alju09g1670 366 PRINTS P-type cation-transporting ATPase superfamily signature 264 276 - -
Alju09g1670 366 PRINTS P-type cation-transporting ATPase superfamily signature 188 198 - -
Alju09g1670 366 PRINTS P-type cation-transporting ATPase superfamily signature 37 51 - -
Alju09g1670 366 PRINTS P-type cation-transporting ATPase superfamily signature 241 260 - -
Alju09g1670 366 PRINTS P-type cation-transporting ATPase superfamily signature 166 177 - -
Alju09g1670 366 SFLD C1.7: P-type atpase like 27 292 - -
Alju09g1670 366 NCBIfam HAD-IC family P-type ATPase 16 319 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1670 Alju-ChrAlju09 40565726 40567676 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1670 1 366 Primary Pumps ATPases AT1G63440 72.152 0.0 552