Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1644 ATGAAGAAGCCGACAATATACCAAGCCGTTTCGCACCAAAATTTAAAAAAAGTTTGCGGGTTTACTGCAACAAGTTCCATGGCGTCTAAGCTCTTAGCTTTGACCTGCTTCCGCGGTGAAGGATGGGATCAGCTATCGTCACGGCCTCATTACCCGTCGATGCCGACGTACCCAAAGGGCGTGGCGGCGGAAGAGGGGAGCCTCGTCGAGGGCTCAGAAGCCAAGGCCCTTTTCTCCGTCGTCGGAATGGCATGCTCTGCCTGCGCTGGCTCCGTCGAGAAAGCCATCAAGCGCCTCCCCGGAATTCGTGAGGCCGTTGTGGATGTTCTCAATAATCGAGCTTTTGTTCTGTTCTACCCCACCTTCGTTAACGAGGAGACTATTCGCGAGGCCATTGAAGATGCTGGGTTTGAAGCTACATTGTTAAGAGATGAGATGAATGAGAGATCCGTTCAAGTATGTCGCATAACCGTAACTGGAATGACCTGCACTTCTTGCTCATCCACTGTTGAATCAGCTCTACAAGCAATTCCAGGCGTGCTGAACGCTCAAGTAGCTTTGGCGACTTATGAAGCAGAAGTACACTACAATCCAAACATTGTCAACCACAATCAAATTCTGGAAGCCATAGAAGACACTGGATTTGAAGCCACACTTATCAGTTCAGGTGAAGACATAAACAAAGTAGAGCTCCAAGTTGAGGGTGTACGAACTGAACATTCCATGAGAATCATTGAAACTTCTCTTAAAGCTCTTCCAGGGGTCCAGGATATAGAATTATATCCTGAGCTGAATAAGATAACGGTTTCTTTCAAACCAGACGTGACAGGACCTAGGAATTTTATCAACGTAACTGAAAAAATTGGGTCCAGGCGTTTCAAGGCTAAATTATTTTCTCAGCAAGGAGAACGAAGAGATACTCACCGAGGGAAGGAAATTAAGCAATATTATAGATCCTTCTTATGGAGTTTGGTTTTTACTGTTCCAGTCTTTTTAACCTCTATGGTTCTTATGTATATCCCGGGAATTAAGCATGGACTAGATACCAAAGTTGTCAATATGCTTACAGTGGGACAGATTATAAGATGGGTACTTTCCACACCAGTACAGTTCATAATAGGCCGAAGATTCTACTCTGGATCTTACAAAGCATTACGCCATGGTTCTGCCAACATGGACGTCTTGATTGCCTTGGGAACAAATGCAGCATATTTCTACTCAGTGTACTCTGTACTGAGAGCTGCTAGCTCCCCACATTTCGAGGGGACTGATTTCTTTGAGACTAGCGCAATGCTTATTTCATTTATTCTGCTGGGAAAGTATCTTGAAGTCTTCACCAAGGGGAAGACATCTAATGCCATCGCGAAGCTCATGAACTTGACCCCAGACACAGCTATATTGTTGACCCTGGACGATGAGGGGAATGTTACTAATGAAGAAGAGATTGACAGTCGATTGATTCAAAAGAATGATCTGATTAAAATTATTCCCGGTGCAAAAGTAGCTTCTGATGGATTTGTTGTCTGGGGCCAAAGCCACGTGAACGAGAGCATGATAACTGGGGAGGCACGTCCTGTTGCGAAGAGGAAGGATGATCCTGTTATTGGAGGAACTGTGAATGAGAATGGAGTGTTGCATGTCAGGGCAACAAGAGTTGGATCAGAGACTGCTCTTTCACAGATTGTTCGACTAGTTGAGTCTGCACAGTTGGCCAAGGCTCCTGTGCAGAAGTTTGCTGATCGCATTTCAAAATTCTTTGTGCCTTTGGTCATTTTAATCTCCTTCACCACTTTTCTTGCATGGTTCTTAGCCGGAAGGTTCCATGCTTACCCGAAATCTTGGATACCATCTTCCATGGATAGTTTTGAGCTTGCTTTACAGTTTGGCATCTCTGTCATGGTCATAGCTTGCCCTTGTGCTCTAGGTCTAGCCACACCAACTGCTGTTATGGTTGGCACAGGAGTTGGTGCATCTCAGGGCGTACTAATCAAAGGAGGGCAAGCATTAGAAAGTACACATAAGGTGCAATGCATTGTCTTCGACAAGACTGGTACTCTCACCATTGGGAAGCCTGTGGTTGTAAACACTAAACTATTGATTAATATGGTCCTCCAAGAGTTCTATGAACTTGTAGCAGGAGCTGAGGTGAATAGTGAGCATCCATTGGCCAAGGCAATTGTTGAGTATGCCAAGAAATTTAAAGATGAAGAGAACCCTGCTTGGCCTGAAGCACGAGATTTTGTCTCCATACCTGGCCATGGAGTGAAGGCCATTGTTCGAAACAAGGAAATAATTGTGGGTAACAAGAGCTTGTTGGCTGACCATAATATTGCAGTTCCAGCTGAGGCAGAAGATATACTGGCTGAGGCTGAGGGGATGGCTCAAACTGGAATTTTGGTATCCATTAATGGGGAAGTGGCTGGAGTTGTAGCAGTATCTGATCCATTGAAACCGGGTGCTCAAGAAGTGATCTCAATTCTCAAGTCCATGAACATCAAAAGCATAGTAGTAACTGGTGACAACCGGGGAACTGCTAATTCTATAGCAAGGGAAGTTGGGATTGATGAAGTCTTTGCTGAAACTAAACCAGAGCAGAAAGCAGAGAAGGTGAAGGAGTTGCAGGCTGCTGGATATACAGTGGCAATGGTTGGGGATGGTATCAATGATTCACCAGCACTTGTAGCAGCAAATGTGGGAATGGCAATTGGTGCAGGCACAGACATAGCGATTGAGGCAGCTGACATTGTTCTGATGAAGAGCAACTTGGAGGATGTGATAACTGCCATTGATCTTTCCAGGAGAACATTTTTCCATATCCGTCTCAATTACATTTGGGCTTTGGGTTATAATCTTCTTGGCATTCCAATCGCTTCCGGAGTTCTTTTCCCTTTCACAGGATTCCGATTGCCTCCTTGGATTGCCGGGGCCGCAATGGCAGCCTCATCTGTGAGTGTTGTTTGTTGCTCTCTATTGCTGAAATATTACAGGAGGCCTAAGAAACTGGACAAGCTTGAGATTCGGGGCATTAGCATAGAATGA 3039 0.4511 MKKPTIYQAVSHQNLKKVCGFTATSSMASKLLALTCFRGEGWDQLSSRPHYPSMPTYPKGVAAEEGSLVEGSEAKALFSVVGMACSACAGSVEKAIKRLPGIREAVVDVLNNRAFVLFYPTFVNEETIREAIEDAGFEATLLRDEMNERSVQVCRITVTGMTCTSCSSTVESALQAIPGVLNAQVALATYEAEVHYNPNIVNHNQILEAIEDTGFEATLISSGEDINKVELQVEGVRTEHSMRIIETSLKALPGVQDIELYPELNKITVSFKPDVTGPRNFINVTEKIGSRRFKAKLFSQQGERRDTHRGKEIKQYYRSFLWSLVFTVPVFLTSMVLMYIPGIKHGLDTKVVNMLTVGQIIRWVLSTPVQFIIGRRFYSGSYKALRHGSANMDVLIALGTNAAYFYSVYSVLRAASSPHFEGTDFFETSAMLISFILLGKYLEVFTKGKTSNAIAKLMNLTPDTAILLTLDDEGNVTNEEEIDSRLIQKNDLIKIIPGAKVASDGFVVWGQSHVNESMITGEARPVAKRKDDPVIGGTVNENGVLHVRATRVGSETALSQIVRLVESAQLAKAPVQKFADRISKFFVPLVILISFTTFLAWFLAGRFHAYPKSWIPSSMDSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESTHKVQCIVFDKTGTLTIGKPVVVNTKLLINMVLQEFYELVAGAEVNSEHPLAKAIVEYAKKFKDEENPAWPEARDFVSIPGHGVKAIVRNKEIIVGNKSLLADHNIAVPAEAEDILAEAEGMAQTGILVSINGEVAGVVAVSDPLKPGAQEVISILKSMNIKSIVVTGDNRGTANSIAREVGIDEVFAETKPEQKAEKVKELQAAGYTVAMVGDGINDSPALVAANVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRRTFFHIRLNYIWALGYNLLGIPIASGVLFPFTGFRLPPWIAGAAMAASSVSVVCCSLLLKYYRRPKKLDKLEIRGISIE 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1644 1012 FunFam Probable copper-transporting ATPase HMA5 792 940 - -
Alju09g1644 1012 SUPERFAMILY HMA, heavy metal-associated domain 71 143 IPR036163 GO:0046872
Alju09g1644 1012 ProSitePatterns E1-E2 ATPases phosphorylation site. 681 687 IPR018303 -
Alju09g1644 1012 FunFam Copper-transporting ATPase HMA5 151 222 - -
Alju09g1644 1012 ProSitePatterns Heavy-metal-associated domain. 80 109 IPR017969 GO:0046872
Alju09g1644 1012 Pfam Heavy-metal-associated domain 78 138 IPR006121 GO:0046872
Alju09g1644 1012 Pfam Heavy-metal-associated domain 156 216 IPR006121 GO:0046872
Alju09g1644 1012 SUPERFAMILY HAD-like 678 989 IPR036412 -
Alju09g1644 1012 PRINTS Copper-transporting ATPase 1 signature 176 197 - -
Alju09g1644 1012 PRINTS Copper-transporting ATPase 1 signature 130 150 - -
Alju09g1644 1012 PRINTS Copper-transporting ATPase 1 signature 75 100 - -
Alju09g1644 1012 PRINTS Copper-transporting ATPase 1 signature 101 124 - -
Alju09g1644 1012 NCBIfam HAD-IC family P-type ATPase 432 961 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju09g1644 1012 ProSitePatterns Heavy-metal-associated domain. 158 187 IPR017969 GO:0046872
Alju09g1644 1012 Gene3D - 763 814 IPR023299 GO:0000166
Alju09g1644 1012 Gene3D - 686 762 IPR023299 GO:0000166
Alju09g1644 1012 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 27 1008 - -
Alju09g1644 1012 PRINTS P-type cation-transporting ATPase superfamily signature 830 840 - -
Alju09g1644 1012 PRINTS P-type cation-transporting ATPase superfamily signature 883 902 - -
Alju09g1644 1012 PRINTS P-type cation-transporting ATPase superfamily signature 906 918 - -
Alju09g1644 1012 PRINTS P-type cation-transporting ATPase superfamily signature 515 529 - -
Alju09g1644 1012 PRINTS P-type cation-transporting ATPase superfamily signature 679 693 - -
Alju09g1644 1012 PRINTS P-type cation-transporting ATPase superfamily signature 808 819 - -
Alju09g1644 1012 SUPERFAMILY HMA, heavy metal-associated domain 150 223 IPR036163 GO:0046872
Alju09g1644 1012 CDD P-type_ATPase_Cu-like 318 993 - -
Alju09g1644 1012 ProSiteProfiles Heavy-metal-associated domain profile. 152 218 IPR006121 GO:0046872
Alju09g1644 1012 Gene3D - 646 940 IPR023214 -
Alju09g1644 1012 FunFam Copper-transporting ATPase HMA5 73 144 - -
Alju09g1644 1012 NCBIfam copper ion binding protein 77 139 IPR006122 GO:0005507
Alju09g1644 1012 NCBIfam copper ion binding protein 156 217 IPR006122 GO:0005507
Alju09g1644 1012 SFLD p-type atpase 661 935 IPR044492 -
Alju09g1644 1012 FunFam Copper-transporting ATPase 1, putative 447 569 - -
Alju09g1644 1012 Gene3D - 226 300 - -
Alju09g1644 1012 SUPERFAMILY Calcium ATPase, transduction domain A 479 565 IPR008250 -
Alju09g1644 1012 NCBIfam heavy metal translocating P-type ATPase 392 992 IPR027256 GO:0006812|GO:0016020|GO:0019829
Alju09g1644 1012 Gene3D - 447 569 - -
Alju09g1644 1012 Pfam haloacid dehalogenase-like hydrolase 676 897 - -
Alju09g1644 1012 Pfam E1-E2 ATPase 478 657 - -
Alju09g1644 1012 CDD HMA 156 218 IPR006121 GO:0046872
Alju09g1644 1012 ProSiteProfiles Heavy-metal-associated domain profile. 227 293 IPR006121 GO:0046872
Alju09g1644 1012 CDD HMA 78 140 IPR006121 GO:0046872
Alju09g1644 1012 ProSiteProfiles Heavy-metal-associated domain profile. 74 140 IPR006121 GO:0046872
Alju09g1644 1012 SUPERFAMILY HMA, heavy metal-associated domain 223 290 IPR036163 GO:0046872
Alju09g1644 1012 Gene3D - 152 222 - -
Alju09g1644 1012 SUPERFAMILY Calcium ATPase, transmembrane domain M 424 671 IPR023298 -
Alju09g1644 1012 Gene3D - 70 141 - -
Alju09g1644 1012 SFLD Haloacid Dehalogenase 661 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1644 Alju-ChrAlju09 40336531 40340975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1644 27 1012 Primary Pumps ATPases AT1G63440 74.824 0.0 1512