Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1641 ATGGATGGGAGAGAAGCTATGGCATTCTCTGGAGGCCCTCCTTCATACTACATGCATAGAGGAGGCATTGTTGGGTCTGTCCCTGGAACACATGCCGGAGGGTTTCATGTGCCTCCTGGGTTCAGACCAAACACCGGCATTCCAGCACAGTCAAACGTACGAGGTAGCTCTATGGGTTCTACAGTTACAGTAGAACCTGTTCGTACCGATTATAGTCATAGCCATGGCATGAGCATTAGTTCGTCTCCTGGAGTACCTCCTTCAAGCGAGCGTGTGAAAAAGAAACGAGGAAGGCCTCGCAAATACCGTCCTGATGGACCTGTTTCTCTGGGTTTGTCTCCCATGTCTGCCACTGCAAATTCTATCCCTGCCTCGAGCACTCCATCCCAGAAACGAGCTAGAGGGCGCCCACCTGGAAGTGGAAGGAAACAACAACTAGCCTTGCTAGGTGAATGGATGAACAGTTCTGCAGGGATGGCTTTTTCACCTCATGTTATCACAATTGGAGCTGGGGAGGACATTGTAGCAAAGTTATTGTCCATTTCACAACAGAGACCGAGGGCGCTGTGCATCTTGTCAGGTACTGGGACAGTTTCATCAGTTACTCTGCTGCAGCCTGCTTCTAGTGTTGTCAGCATCACTGTTGAGGGCCGATTCCAAATATTACGCTTGTCTGGTTCTTACCTGGTTGACGAAGATGGTGGACACCGTAGTAGAACAGGTGGCGTGAGTGTTTCCCTTGCTAGTCCTGATGGTCATGTTATCGGTGGTGCGGTTGCTGTGCTTATTGCTGCAAGCCCAGTGCAGGTGGTAGTGTGCAGTTTTATATATGAAGGGTCCAAGACCAAGACTAAGCAATTGAGTGCCCTGGAGGGCGATGTTTCTGAAGCTCAGCATGATAACAAGTTAGCAAATCCGGCAAGTGCTCCACCGTCTCACAACTACAGTCAACCAACAAGAAGCATTTGGCGATCCGATCTAAAAAGTATACACACTGGTATTGACTTGATGCATGGATAA 1020 0.4922 MDGREAMAFSGGPPSYYMHRGGIVGSVPGTHAGGFHVPPGFRPNTGIPAQSNVRGSSMGSTVTVEPVRTDYSHSHGMSISSSPGVPPSSERVKKKRGRPRKYRPDGPVSLGLSPMSATANSIPASSTPSQKRARGRPPGSGRKQQLALLGEWMNSSAGMAFSPHVITIGAGEDIVAKLLSISQQRPRALCILSGTGTVSSVTLLQPASSVVSITVEGRFQILRLSGSYLVDEDGGHRSRTGGVSVSLASPDGHVIGGAVAVLIAASPVQVVVCSFIYEGSKTKTKQLSALEGDVSEAQHDNKLANPASAPPSHNYSQPTRSIWRSDLKSIHTGIDLMHG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1641 339 MobiDBLite consensus disorder prediction 45 87 - -
Alju09g1641 339 MobiDBLite consensus disorder prediction 301 320 - -
Alju09g1641 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 275 IPR005175 -
Alju09g1641 339 MobiDBLite consensus disorder prediction 34 143 - -
Alju09g1641 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 70 311 IPR039605 GO:0003680
Alju09g1641 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 160 277 - -
Alju09g1641 339 CDD DUF296 163 275 IPR005175 -
Alju09g1641 339 Gene3D - 163 296 - -
Alju09g1641 339 MobiDBLite consensus disorder prediction 113 133 - -
Alju09g1641 339 ProSiteProfiles PPC domain profile profile. 156 296 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1641 Alju-ChrAlju09 40312691 40315447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1641 1 277 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 57.143 1.63e-95 286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1641 09 40312691 40315447 Alju09g1641 09 40312691 40315447 ECH