Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1627 ATGGTACGAGAGAACCTGAAGAAACAACTCGCCTTGGCTGTGAGAAGCGTCCAATGGAGCTACGCAATCTATTGGTCTGGTTCACCTGACAACCCCGGGGTTTTCGAGTGGGGTGAAGGGTATTACAATGGGGACATAAAGACGAGGAAAACAAGCCAAGCAGGACAATTTAATTCAGACCAAATAGGTTTACGAAGGAGTGAGCAACTCAGAGATCTCTATGAGTCTCTTGCAACTGCAGAATCAAGTCCACAAGCCAAAAGGCCTTCAGCTTCACTATCACCTGAGGATCTCACTGATACAGAATGGTATTATTTGGTGTGCATGTCATTTGTATTCAACATTGGCCAAGGGTTGCCTGGAAGAACTCTGGCGAAAGGTCAACCTATTTGGCTGTACAATGCCCATCTGGCTGATAGTAGAATTTTTAGTCGTTCTCTTCTGGCAAAGAGTGCATCCATTCAGACAGTGGTATGCTTCCCTTTTCTGGATGGTGTTCTTGAGCTAGGCACAACCGATCCAGTTTCAGAGGACCTCAGTCTCATTCAACGCATGAGAGCTTCTTACTTGGACATTTTAGATGCCAAAGTTCGCAAGAACTCTGTAGTTGCATTCAATGCAGGAGATGGCGAAGAAATCGCCGGTGCAGTATTTGATCATAATGCTTTTGATGTAACATTGACTCCTGAATCAGAATATGACTTGGCCAATGCAATTTCTCCCAATAATAGTTCAAATGAGTTCCAAGCCAATAAACAAGCAGATGAGAGATTCATGGTTGAAAGAATAAATGGTGTTGCTTCCCATGTCCAAAGCCAGCAAGTAATGGAGGATGAGTTGAGTAATTGTGCCCATACTTCCATGAATACTAGTGACTGTATATCTCAAAGTTTTGCTGGTTCTGAAAAGAATGCTTCAGTTCCCAAGGTTGATCATTGTGGGCAAGATCTTCAAGAGGGTCAAAACACAAGAATGACCATGGTAGATGCTCACAGTGATGATTGGCATTATCAAAATGTTCTTTCTTCTCTTCTTAAAAGCTCAGACCAATTAATTATGGGAGCATATTTTCAAAAATTCCATTGTGAATCTGGTTTTGTCAGTTGGAAGAGAGAAGGATCAATGGGTTGTCAATGGCCAAGAGGGGGAACTCACCAAAAAATATTGAAGAAGATATTGTTTGAAGTTCCACGTATGCACACGGATATGTTGCTTGAGGCTCAAGAAGAAAATGACTATGAAGAGGGAATGAGACCTGAAGCTGATGAAATTGGCTTGAACCATGTACTGTCTGAAAGAAAGAGAAGGGCAAAACTAAATGAAAGGTTTTTAACCCTCAAATCAATGGTTCCTTTGATTACTAGGGATGACAAAGTTTCTATACTAGATGAGGCGATAGAATACCTTAAAAAGCTGGAGAAAAAGGTGGGAGAGTTGGAAGCTCGCCGGAAGTCCAAAGATTCCGAGGCTAGAACTAAAAGAGCACCTCAAGATGTTGTGGAAACGACTTGTGATAATTATTGTAACAACAGATCTGATAATGGCAAGAAGCCAGCGAAGAACAAAAGGAAGGCTGGTGACATTGATGAGACAGAGACAGAGATTGATTCGGTTCGTCTAAAAGATATTTCTAATAATGTTACTATCTGCATGAACGACAACGAGGTTTTGATTGAATTGAAGTGTCCTTGGAGAGAAGGAGTTCTACTAGAAATAATGGAAGCAGTCAGCAATCTTCATTTAGATTTTCATTCAGTTCATTCATCAGAAGCTGATGGGACTCTCTATTTAACCATGAAATCCAAGATCAGAGGAGCAGCTTTTAACTCAACAAAAAATATCAAACAAGCACTCCTCAAGGCAGCTTGGAAGTGTTGA 1878 0.4116 MVRENLKKQLALAVRSVQWSYAIYWSGSPDNPGVFEWGEGYYNGDIKTRKTSQAGQFNSDQIGLRRSEQLRDLYESLATAESSPQAKRPSASLSPEDLTDTEWYYLVCMSFVFNIGQGLPGRTLAKGQPIWLYNAHLADSRIFSRSLLAKSASIQTVVCFPFLDGVLELGTTDPVSEDLSLIQRMRASYLDILDAKVRKNSVVAFNAGDGEEIAGAVFDHNAFDVTLTPESEYDLANAISPNNSSNEFQANKQADERFMVERINGVASHVQSQQVMEDELSNCAHTSMNTSDCISQSFAGSEKNASVPKVDHCGQDLQEGQNTRMTMVDAHSDDWHYQNVLSSLLKSSDQLIMGAYFQKFHCESGFVSWKREGSMGCQWPRGGTHQKILKKILFEVPRMHTDMLLEAQEENDYEEGMRPEADEIGLNHVLSERKRRAKLNERFLTLKSMVPLITRDDKVSILDEAIEYLKKLEKKVGELEARRKSKDSEARTKRAPQDVVETTCDNYCNNRSDNGKKPAKNKRKAGDIDETETEIDSVRLKDISNNVTICMNDNEVLIELKCPWREGVLLEIMEAVSNLHLDFHSVHSSEADGTLYLTMKSKIRGAAFNSTKNIKQALLKAAWKC 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1627 625 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 426 485 IPR036638 GO:0046983
Alju09g1627 625 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 423 472 IPR011598 GO:0046983
Alju09g1627 625 Gene3D - 426 496 IPR036638 GO:0046983
Alju09g1627 625 MobiDBLite consensus disorder prediction 508 528 - -
Alju09g1627 625 Pfam Helix-loop-helix DNA-binding domain 427 473 IPR011598 GO:0046983
Alju09g1627 625 Coils Coil 462 489 - -
Alju09g1627 625 SMART finulus 429 478 IPR011598 GO:0046983
Alju09g1627 625 PANTHER TRANSCRIPTION FACTOR TT8 3 620 - -
Alju09g1627 625 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 187 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1627 Alju-ChrAlju09 40226672 40229867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1627 2 625 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 47.139 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju09g1627 bHLH-MYC_N 4.9e-49 CL0161