Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1612 ATGGCACGATGGTCAGGTTTCACAAATGGATCTTCCGAAGATTGCTTTGAAACTGTTGGAGGACATCAGGGTAATGACTGTTGCCTCAACGTTGCTCACGTTGTTAGAGATCAACTTGATGATGAAGTTAAACTAGAGTGCTTGTTTCATCGGCTTCTATCAGTTTATATCAAGGAGAAGAATTCTAGTGGCATTATTCGTCCTCTTCCTGTAATGCTTGGTGATGGTCAATCGTTGGATCTATACAAACTGTTCTTCTTTGTAAAGGAAAGAGGTGGGTACGCTTTGGTGTCGGAGAAAGGATTGTGGGGTCTTGTGACTAAGGAATTAGGTTTGAACCCTAAACTTTTGGCTTCGGTGAAATTGGTATATGACAAGTATTTGAATGAGTTTGATAGATGGCTTAGCAAAAATCGTGGAGGAAAGAATTTCAAAAGTGGGAATCATGGGTGTAATATAGATTTCAAGTCAGTGCCGCCAGAGCTAGCAAAAGAGTTTAGAGATTTATTATGCTGCGACGGCGAGTTGAAGGATGATGTATCTGTTCAGCTGCTATCATGTAAAATGAGAAGCAACATTGATTTGATTAATCACGAGAGTGAGATGAATTTATTGGACAACAAAAATCAACCTCCTATATGCGAGAATGTCCACGGTATCCTGGGTGATGTTGACTTGAAATTTTGTAACAGTGTTGAGGATGATCTGCTTAGCATGAACTCAGAAGTTCCTGTGAAGGAATTTAGTTCTCGCAAGCGCAAACGAGAAGCATTATCTTCAATGCTGAACTGGATCAGAAAAATTGCAAAGCATCCTCGTGATCCTTCAATTGAACAGATACCTGAAGCTTCTAAGTGGAAGGAGTATAAAGGACAAGATTTTTGGGTTCAGATACTTAGAGCAAGAGAGGCACTGCAGCTGAAATCTTGCGACAAACCAAACTGTGGGCAATCTTCCTTGCAGAAGCAAAAGATGCATCCCGCCATGTATGAGGACCATGCTGCTGCCAGTCACCATTCTACAGCAAAAATGAGATGGAGCAAAAGGCTGCCTACCTCAATTAAATCTCAAATATGCTCTTGTTGCGATTCTCATTCAGCTATTGAAAACAAGTTACCCTGTTCAGTCACCACTGAGGCAGAAAATGCTTCACTAGAGAAAAAAACTGCAGCAGATGGTTCGTTGAATGCAAAGGAAACAGCTAACACGTCCACAGATGATACTGTCAAAAAAGTAGTAGCTATAGGTCCTCTTTTTCAAGCTGAAGTGCCAAAATGGACTGGTGTTGTTTCTGAAAGCGATTCTAAATGGTTGGGCACACAAGTATGGCCTTTGAAGGATAGGGAACCGCAATCTTTTACTGAGACCAGTATTATTGGGAGAGGAAGACAAGAGACTTGTGGCTGTCAAGTTCAAGGTTCTGTTGAATGTATTAGATTTCATATTGCTGAGAAGAGGATGAAGTTGAAGCTTGACTTGGGCTTAGCATTTTACCATTGGGGATTTGATCGTATGGGAGAGGAAGTTTCACTTCAATGGACTCCTGAACAAGAAAAGAAATTCAAAGATATTATGATGTCAAATCTGCCCTCCCAAAATAAGAGCAAGCCGTTCAAGTATTTTCCTAAGAAGACGAGAAAAAACTTGATTAGTTATTACTTCAATGTATTTCTTATTCAACGCAGGATTTATCAGAATCGTGTGACTCCAAATCATGTTGATAGTGATGATGACGAACATGAATTTGGATCTTTTACCAACGGCTTCGGAATGGAAGCTTTAAAGGGTCCAGGTTATAAGTTTCTGGAGTGTTCACTGAACAACCTATGCACTGAATTGGAGTGA 1845 0.4038 MARWSGFTNGSSEDCFETVGGHQGNDCCLNVAHVVRDQLDDEVKLECLFHRLLSVYIKEKNSSGIIRPLPVMLGDGQSLDLYKLFFFVKERGGYALVSEKGLWGLVTKELGLNPKLLASVKLVYDKYLNEFDRWLSKNRGGKNFKSGNHGCNIDFKSVPPELAKEFRDLLCCDGELKDDVSVQLLSCKMRSNIDLINHESEMNLLDNKNQPPICENVHGILGDVDLKFCNSVEDDLLSMNSEVPVKEFSSRKRKREALSSMLNWIRKIAKHPRDPSIEQIPEASKWKEYKGQDFWVQILRAREALQLKSCDKPNCGQSSLQKQKMHPAMYEDHAAASHHSTAKMRWSKRLPTSIKSQICSCCDSHSAIENKLPCSVTTEAENASLEKKTAADGSLNAKETANTSTDDTVKKVVAIGPLFQAEVPKWTGVVSESDSKWLGTQVWPLKDREPQSFTETSIIGRGRQETCGCQVQGSVECIRFHIAEKRMKLKLDLGLAFYHWGFDRMGEEVSLQWTPEQEKKFKDIMMSNLPSQNKSKPFKYFPKKTRKNLISYYFNVFLIQRRIYQNRVTPNHVDSDDDEHEFGSFTNGFGMEALKGPGYKFLECSLNNLCTELE 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1612 614 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 40 590 - -
Alju09g1612 614 SMART bright_3 44 137 IPR001606 GO:0003677
Alju09g1612 614 Pfam ARID/BRIGHT DNA binding domain 49 132 IPR001606 GO:0003677
Alju09g1612 614 ProSiteProfiles ARID domain profile. 43 136 IPR001606 GO:0003677
Alju09g1612 614 Gene3D - 34 146 IPR036431 GO:0003677
Alju09g1612 614 SMART ELM2_2 413 464 IPR000949 -
Alju09g1612 614 CDD ARID 49 132 - -
Alju09g1612 614 SMART ARID_2 40 132 - -
Alju09g1612 614 SUPERFAMILY ARID-like 38 139 IPR036431 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1612 Alju-ChrAlju09 40107570 40111586 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Alju09g1612 ARID 2.7e-10 CL0123