Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju09g1606 | ATGGGCTGTTGCCGTTGCTATTGCTGTTACTGTTGCTGTTGCAGTCCTCCCAAAGAAACTGAACTAAGCGATCCACCACCGTCCTTCAATAACCCAGGAGCATCAGAGGAGCCTTTTCTACTATCACCTGTTCATGGTTCTGCCTCTGCTTCCTCCGGAGGGCCCCTTGTTGATGCTAATCTTGAAACTTCAACTCTTGACACTAATACACCACCTCCTGCTCCTGTTCCTTCCAGCAGTGATACCGTGGCTGTCACTCAAACTCTACTCAGGGCTAGTGAAATTAGTGATAATAAGACTAATGCATCCCTTCAATCTGCAAATCCTAATTCAGTTCAAGACATAGCTAGAACTAGCGATGGTCATGCAGATCTAGAAGACACTGAACTGGACTTGGCTGAGGACTCAGAAAATGAACTTCAAAATGTAGAAAAACCGGCCAATTTAGCTGAAGAGAAGGATGGATGTCCTATCTGTTTAGAAGGGTATAATGCCGTGGATCCAAAACTAAGCATAAAATGTGGTCATCATTTTCACCTTGCATGCATTCTAGATTGGAGGGAAAGAAAGAATACCTGTCCCGTGTGTGAAAGGGATATTCTTTTTGATCCTCCAATTGATTAA | 624 | 0.4375 | MGCCRCYCCYCCCCSPPKETELSDPPPSFNNPGASEEPFLLSPVHGSASASSGGPLVDANLETSTLDTNTPPPAPVPSSSDTVAVTQTLLRASEISDNKTNASLQSANPNSVQDIARTSDGHADLEDTELDLAEDSENELQNVEKPANLAEEKDGCPICLEGYNAVDPKLSIKCGHHFHLACILDWRERKNTCPVCERDILFDPPID | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju09g1606 | 207 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 131 | 203 | IPR013083 | - | |
| Alju09g1606 | 207 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 48 | 202 | - | - | |
| Alju09g1606 | 207 | SUPERFAMILY | RING/U-box | 144 | 203 | - | - | |
| Alju09g1606 | 207 | Coils | Coil | 133 | 153 | - | - | |
| Alju09g1606 | 207 | SMART | ring_2 | 156 | 196 | IPR001841 | - | |
| Alju09g1606 | 207 | Pfam | Ring finger domain | 156 | 196 | IPR001841 | - | |
| Alju09g1606 | 207 | ProSiteProfiles | Zinc finger RING-type profile. | 156 | 197 | IPR001841 | - | |
| Alju09g1606 | 207 | MobiDBLite | consensus disorder prediction | 94 | 115 | - | - | |
| Alju09g1606 | 207 | MobiDBLite | consensus disorder prediction | 45 | 69 | - | - | |
| Alju09g1606 | 207 | MobiDBLite | consensus disorder prediction | 23 | 82 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju09g1606 | 11 | 207 | C3H Transcription Factor Family | AT5G41350 | 37.619 | 2.23e-36 | 125 |