Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1599 ATGTCTTCAAATGCCTACGCTTTTGATTCTTCTTTTCCCAGACATTCGACCTCATCGGACATGGCTTCCTCCGAGACACCTGGCGGCGGCGACCTTTTCTTCTCCGACCCTTTTCCTTTCCCTTTCTTCAACCCCACCGACGTGGCCGCCGTTCAGCAGATTCCAAGCGGAACTGCTTCTTCTTCTTCTCTTGACCCTTTTTCCTCTTCCTTCTTTTCCTTTTCTCCTCCAAGTACCCACCTGGAAAATCTCAGCCTTTATCAGCAGCATCTAGAAACAGAGTTTGGAAATTTCTCTGGTCTTGATGATGGGTCCAAAGTAGTGAAGAGTGAAGAATTACAAATGGGCGGTGATTACAGCAACGGAAATCAGAACTTTGTTCCTCAAAATAACGCTTCTGAAAATGTACACAAGTCCATTCAAAGGAGCTACAGTAGTAACTGTTTTGATGGGAAACCTGGTTTTCTGTTTCAACCTCACTATGATACTCTCATAGATTCCTCAAACTTTCATGGCCAGGCCATGAATTCTCCTGAGAACAATCAAGTAAGAAGAGTGTGCAGTACAGGAGACTTGCAGAACATGGAATCATCAACTCAAACGAACCAGAGGGAAGGGTCGTTCTTAGAGGAAGCAAATTTCAAAGTAGGCCGTTACAGTGCCGAAGAAAGAAAAGAGAAAATCTCTAAGTACAGAGCCAAGCGAAGCCAGAGGAACTTCAACAAGACCATCAAGTATGCATGCCGGAAAACACTGGCGGATAATCGGCCACGCATACGTGGCAGATTTGCACGAAACGACGAGACGGGCGAGAATTCCAAGGGTTCATGTTCAACCAGAAATGAAGAAGAAGACGAGTTCTGGTTTGAAGGAATGCATGAAGAACAAGAGCAGGTGATGACGTGGAGGATGATGAGAGGAGGAGGAGAATACATGAACAGTTATGGATCAGATCCTCTTCATCAACATCAGTTCCAATAA 981 0.4506 MSSNAYAFDSSFPRHSTSSDMASSETPGGGDLFFSDPFPFPFFNPTDVAAVQQIPSGTASSSSLDPFSSSFFSFSPPSTHLENLSLYQQHLETEFGNFSGLDDGSKVVKSEELQMGGDYSNGNQNFVPQNNASENVHKSIQRSYSSNCFDGKPGFLFQPHYDTLIDSSNFHGQAMNSPENNQVRRVCSTGDLQNMESSTQTNQREGSFLEEANFKVGRYSAEERKEKISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNDETGENSKGSCSTRNEEEDEFWFEGMHEEQEQVMTWRMMRGGGEYMNSYGSDPLHQHQFQ 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1599 326 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 64 284 IPR045281 GO:0009909
Alju09g1599 326 MobiDBLite consensus disorder prediction 1 28 - -
Alju09g1599 326 MobiDBLite consensus disorder prediction 1 25 - -
Alju09g1599 326 Pfam CCT motif 224 266 IPR010402 GO:0005515
Alju09g1599 326 ProSiteProfiles CCT domain profile. 224 266 IPR010402 GO:0005515
Alju09g1599 326 MobiDBLite consensus disorder prediction 261 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1599 Alju-ChrAlju09 39962508 39963850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1599 88 272 C2C2-CO-like Transcription Factor Family AT5G24930 27.749 8.35e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju09g1599 CCT 5.3e-18 CL0281