Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1597 ATGGGATTTCCGGTGGGTTACTCCGACCTCATCTTCCCCAAGATATTCCTTCACGTCCTTTCTCTTCTTGGTCTCATCCGAAAGCTCATCACCGTTCTCTTTCGCTATTTGGGCCTCCACGATTTTCTGGAGCCCGACATTGTTTGGGCCCACCCGGTACCCGAATTCCAGTCGGTGTCGGCCATGCTCATCCGAGAAATCCTGCCGGTCGTCAAGTTCTCCGATCTGGTGGACCCGCCGGATAGCTGCGCCGTCTGTCTCTACGAGTTCGAGGCCGACGACGAGATCAGACGGCTCACCAACTGTAGGCACATTTATCACCGGGGATGTCTGGACCGTTGGATGGGTTACGATCAGATAACTTGTCCTCTTTGTCGAACACCTTTCATACCTCACGATATGCAAGCTGCCTTTAATGATAGGCTCTGGGCTGCTTCTGGCATTCCTGAATTTTATGCTGATTCTGATGAATATCCTCATCTTTCTTCTTTTTAA 495 0.5091 MGFPVGYSDLIFPKIFLHVLSLLGLIRKLITVLFRYLGLHDFLEPDIVWAHPVPEFQSVSAMLIREILPVVKFSDLVDPPDSCAVCLYEFEADDEIRRLTNCRHIYHRGCLDRWMGYDQITCPLCRTPFIPHDMQAAFNDRLWAASGIPEFYADSDEYPHLSSF 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1597 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 129 IPR013083 -
Alju09g1597 164 SMART ring_2 83 125 IPR001841 -
Alju09g1597 164 CDD RING-H2_RHA1-like 81 129 - -
Alju09g1597 164 Pfam Ring finger domain 81 126 IPR001841 -
Alju09g1597 164 ProSiteProfiles Zinc finger RING-type profile. 83 126 IPR001841 -
Alju09g1597 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 145 - -
Alju09g1597 164 SUPERFAMILY RING/U-box 63 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1597 Alju-ChrAlju09 39940104 39940598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1597 1 147 C3H Transcription Factor Family AT1G63840 62.338 2.61e-64 192