Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1578 ATGAGGGATCTGACTTTCACATCATCAGAGTCAGCCACTGTTTCCTTCATGGATGAACTTGCGTGCTTCATGGACTGGGATTTGCAAGCTGTTGTGAGAGGCTACACCGGTGAACAAGCCCCATCAGAAACAACCACCACCACGATCATAGATATAACAAGCCCTAATTTTCCTCATTTCTGTTCTGAATTACATGTTCAGGACGATGATCCTTTCTGTAGTACTTTTCCAGAATTCTCAGACACCACCCTGATGTTTGATGAATTGGGAGATCTTTACAAGCCTTTCTCATCAACACAAACAATCACCTCACCCATCCCAAAAGAAGTAGTCATCAAAGCATCAGATCAGGAAGTTCAAGATTTGCATGAATCTCCACGCAAAAGAATAAGCAAGAAGAACCAGAACAAGAGAGTGGTGAAGCAGGTGAGAGGAGATGGACTATGCGACGCCTGGGCGTGGAGGAAGTACGGGCAGAAACCGATCAAGGGATCGCCGTATCCGAGAAGCTACTACAGATGTAGCAGCTCCAAAGGATGCTTGGCGAGGAAACAAGTTGAAAGGAGCCATTTGGATCCACAAGTTTTCATAGTGACTTATACTGCAGAACACAGTGATCATGATCACCCACCTCGCTCCTCTCGCAAAACTAGGCAATATTCTAATATTGTTGTTCCACCTGAAACTACTCATGAACACATGACTTCTTCTGATAATCCTTTGGAAGATTCCATTGAAGATGAGCCAATTGTTGTGTCCGGTGGATCAAACCAGTGCCCGAACAAAGACCAATTATCGTCCCATGTTGCTCAAATTGGTGAGATTGTTACGGGTCATGATAAATTAATCAATGATGATTGGTATTCAAGTATAGACGAACTTGACGGACTTAGCCAAGAATTTGCATTAGATAGTTACCTTCATGGCCAACTGTGA 936 0.4359 MRDLTFTSSESATVSFMDELACFMDWDLQAVVRGYTGEQAPSETTTTTIIDITSPNFPHFCSELHVQDDDPFCSTFPEFSDTTLMFDELGDLYKPFSSTQTITSPIPKEVVIKASDQEVQDLHESPRKRISKKNQNKRVVKQVRGDGLCDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPQVFIVTYTAEHSDHDHPPRSSRKTRQYSNIVVPPETTHEHMTSSDNPLEDSIEDEPIVVSGGSNQCPNKDQLSSHVAQIGEIVTGHDKLINDDWYSSIDELDGLSQEFALDSYLHGQL 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1578 311 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 105 247 IPR044810 GO:0003700
Alju09g1578 311 Pfam WRKY DNA -binding domain 150 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju09g1578 311 ProSiteProfiles WRKY domain profile. 143 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju09g1578 311 SUPERFAMILY WRKY DNA-binding domain 146 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju09g1578 311 Gene3D WRKY domain 132 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju09g1578 311 FunFam WRKY transcription factor 22 132 202 - -
Alju09g1578 311 SMART WRKY_cls 148 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1578 Alju-ChrAlju09 39758128 39759380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1578 17 212 WRKY Transcription Factor Family AT4G23550 46.083 1.44e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju09g1578 WRKY 7.1e-24 CL0274