Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1574 ATGGCAAGCGAACTTGAAAAGAAAGCCAAAGAAGCCTTCTTCGACGATGACTTTGCTCTCGCTGTTCAATTGTACTCTCAAGCAATCGACTTGGATCCCTCCAACGCCGATCTCCTTGCCGATAGAGCTCAGGCCCACATTAAACTCAACAACTTCACCGAAGCGGCTTCGGATGCAAGCAAAGCAATCGAATTGAACCCATCGTTGATAAAAGCGTATATTCGTAAAGGGACTGCATGTTTAAAGCTTGAAGAGTATTATGCTGCCAAGGTGGCGCTTGAGACTGGTGCTTCTTTGTCTGAAAACGACTCAAGATTCACCAAGTTGATTGAAGAATGCAATCGCCATGTTCCAAAGGAATCCAATGGTCGCAGTAGCTCTTTATTACCAAATGTGGCAGCATTGAGTGTATCGCCTAGTACAACAGCAGAAGATGAAGGACTTAGTCGTGCGCATCAAGCAAACACTGATACCGTTGCGAAACCAAGATACAAACATGAATACTACCAAAAGCCAGAGGAAGTGGTTTTGACAATTTTTGCAAAAGGAATACCAGCAAAAAATGTGGTTGTTCAGCTTGGAGAACAAATTCTGAGCGTTGCTATTGATGTTCCTGGCCAAGAAGCCTACCACTATCAATGTCGATTGTTTGGAAAGATAATGCCTGATAAGTGCAGATTTGTGGTGCTGTCAACTAAAATTGAAATCCGTCTAGCCAAGGCTGAAGCTATTACTTGGACATCTCTTGAATATAGCAAGGAAGCTGTTCTTCAGACAAAAAATATCCCATCAGCTAAATCTCATACGCCTGAGTACCCATCATCAAAGCTTAAGAAAGATTGGGATAAGCTGGAAGCTCAAGTGAAGAAAGAGGAGAAGGAAGAAAAGCTAGATGGTGATGCTGGTTTGAACAAGCTGTTCCGAGATATATTCCAAAATGCAGATGAGGACATGAGAAGAGCCATGACCAAGTCTTTTGTGGAGTCGAATGGGACAGTTCTGTCAACAGACTGGAAAGAAGTGGGATCAAAGAAGGTTGAAGGCAGTCCTCCAGAAGGTATGGAGCTGAAGAAATGGGAATACTGA 1086 0.4319 MASELEKKAKEAFFDDDFALAVQLYSQAIDLDPSNADLLADRAQAHIKLNNFTEAASDASKAIELNPSLIKAYIRKGTACLKLEEYYAAKVALETGASLSENDSRFTKLIEECNRHVPKESNGRSSSLLPNVAALSVSPSTTAEDEGLSRAHQANTDTVAKPRYKHEYYQKPEEVVLTIFAKGIPAKNVVVQLGEQILSVAIDVPGQEAYHYQCRLFGKIMPDKCRFVVLSTKIEIRLAKAEAITWTSLEYSKEAVLQTKNIPSAKSHTPEYPSSKLKKDWDKLEAQVKKEEKEEKLDGDAGLNKLFRDIFQNADEDMRRAMTKSFVESNGTVLSTDWKEVGSKKVEGSPPEGMELKKWEY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1574 361 Gene3D - 156 266 IPR008978 -
Alju09g1574 361 Coils Coil 274 294 - -
Alju09g1574 361 FunFam Protein SGT1 homolog 1 128 - -
Alju09g1574 361 ProSiteProfiles SGS domain profile. 271 361 IPR007699 -
Alju09g1574 361 FunFam Protein SGT1 homolog A 159 263 - -
Alju09g1574 361 SUPERFAMILY TPR-like 2 113 IPR011990 GO:0005515
Alju09g1574 361 CDD p23_CS_SGT1_like 167 250 - -
Alju09g1574 361 SMART tpr_5 2 35 IPR019734 GO:0005515
Alju09g1574 361 SMART tpr_5 36 69 IPR019734 GO:0005515
Alju09g1574 361 SMART tpr_5 70 103 IPR019734 GO:0005515
Alju09g1574 361 Gene3D Tetratricopeptide repeat domain 1 127 IPR011990 GO:0005515
Alju09g1574 361 ProSiteProfiles CS domain profile. 161 250 IPR007052 -
Alju09g1574 361 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Alju09g1574 361 PANTHER PROTEIN SGT1 HOMOLOG 1 359 IPR044563 GO:0051087
Alju09g1574 361 Pfam CS domain 165 240 IPR007052 -
Alju09g1574 361 SUPERFAMILY HSP20-like chaperones 155 257 IPR008978 -
Alju09g1574 361 Pfam Tetratricopeptide repeat 17 55 - -
Alju09g1574 361 Pfam SGS domain 279 359 IPR007699 -
Alju09g1574 361 ProSiteProfiles TPR repeat profile. 36 69 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1574 Alju-ChrAlju09 39721019 39724042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1574 1 112 U-box Gene Family AT3G07370 27.679 1.61e-07 50.4