Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1559 ATGCCGACAGTAAGAAGGAGCCAACTTGGAGCCGGAGGTTGCCGCCTCATTCTCAGGCCGCCGACCAAGACCATTCTCTCTACAACTGCCGTTGACCCGACCCTGACCCCATCTATGGGCAATTGCAGCGGCGTCCCTTCCGCCCAAAACCAACTCAGCTCCGACGCCCCCGACCTTGCCCCACCTACCAATGGCCTTTCCATCCTTCCTCCAAATTCTGAGCCCACACCACCTGGACCACCTCTCTTCCCCGCCGTTGGCCGCGTACTTGGCCGTCCCATGGAGGACGTCCGTTCCACCTACATCTTCGGCCGCGAACTAGGTCGTGGTCAATTTGGTGTCACCTACTTAGTCACCCACAAAGTCACTAAGCAACAATTCGCTTGCAAATCCATCGCCACGCGCAAACTCATCAACCGCGACGATATCGACGACATTCGCCGCGAGGTCCAGATCATGCACCACCTCACCGGTCATCGCAACATTGTGGAGCTCAACGGAGCTTATGAGGATCGCCACTCTGTCAATTTGGTCATGGAGCTCTGCGCTGGTGGGGAGCTCTTCGATAGGATCATAGCCAAAGGCCATTACTCGGAGCGTGCGGCAGCAAATTTGTGCCGCCAGATCGTGACGGTCGTGCATAGTTGTCACTCCATGGGAGTGTTTCATAGGGATTTGAAGCCTGAGAATTTCTTGTTCCTCAGTAAACACGATAATTCGCCTCTTAAGGCCACTGATTTTGGTCTCTCCGTGTTCTTCAAGCCAGGAGATGTATTTAGCGATCTTGTTGGGAGTGCATATTATGTTGCTCCTGAGGTGCTTCGTAGAAGTTATGGACCAGAAGCTGATATTTGGAGTGCCGGGGTTATATTATACATTCTGCTTAGCGGTGTCCCGCCTTTCTGGGCTGAACATGAACAGGGAATCTTTGATGCTATTCTCCGTGGACATATTGATTTTGTGTCAAAACCTTGGCCTTCTATATCAAGTAGCGCCAAAGATTTGGTTCGAAAGATGCTGCGAGCTGACCCCAGAGAACGGCTTTCAGCCGTTGATGTCCTTAATCATCCTTGGATGAGAGAAGATGGGGATGCATCTGATAAGCCTCTTGACATTGCTGTTTTGACCAGAATGAAACAATTCCGAGCAATGAACAAACTAAAGAAAGTAGCTCTGAAGGTAATTGCAGAAAATCTTTCTGAAGAAGAAATCATTGGCTTGAAGGAGATGTTCAAATCTATGGACACAGATAACAGTGGAACTATCACTTTTGAAGAGTTGAAAGTTGGTCTCCCCAAATTGGGTAGTAAGCTTTCTGAGTCTGAAGTGAGGCAGCTGATGGAAGCGGCTGATGTAGATGGAAATGGAACAATTGATTACATTGAATTTATAACAGCCACCATGCACTTGAATAGAATGGAAAGAGAGGACCACCTATACAAAGCATTTGAATATTTTGACAAGGATAGGAGCGGGTATATCACTAGGGAAGAGTTGGAATATACACTGAAGAAGTATAATATGGGTGATGAAAAAACAATAAAGGAGATCATTGCTGAAGTTGATGCAGACAATGATGGAAGAATTAATTATGAAGAGTTTGTTGCCATGATGAGAAAAGGCAACCCAGAGACGGTGAACAACAGGCGTCGCAAGTAA 1659 0.4768 MPTVRRSQLGAGGCRLILRPPTKTILSTTAVDPTLTPSMGNCSGVPSAQNQLSSDAPDLAPPTNGLSILPPNSEPTPPGPPLFPAVGRVLGRPMEDVRSTYIFGRELGRGQFGVTYLVTHKVTKQQFACKSIATRKLINRDDIDDIRREVQIMHHLTGHRNIVELNGAYEDRHSVNLVMELCAGGELFDRIIAKGHYSERAAANLCRQIVTVVHSCHSMGVFHRDLKPENFLFLSKHDNSPLKATDFGLSVFFKPGDVFSDLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLSGVPPFWAEHEQGIFDAILRGHIDFVSKPWPSISSSAKDLVRKMLRADPRERLSAVDVLNHPWMREDGDASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKVGLPKLGSKLSESEVRQLMEAADVDGNGTIDYIEFITATMHLNRMEREDHLYKAFEYFDKDRSGYITREELEYTLKKYNMGDEKTIKEIIAEVDADNDGRINYEEFVAMMRKGNPETVNNRRRK 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1559 552 Gene3D - 368 542 - -
Alju09g1559 552 FunFam Calcium-dependent protein kinase 1 103 186 - -
Alju09g1559 552 CDD EFh 407 466 IPR002048 GO:0005509
Alju09g1559 552 PANTHER SERINE/THREONINE-PROTEIN KINASE 98 534 - -
Alju09g1559 552 Gene3D Phosphorylase Kinase; domain 1 103 186 - -
Alju09g1559 552 SMART efh_1 442 470 IPR002048 GO:0005509
Alju09g1559 552 SMART efh_1 478 506 IPR002048 GO:0005509
Alju09g1559 552 SMART efh_1 406 434 IPR002048 GO:0005509
Alju09g1559 552 SMART efh_1 513 541 IPR002048 GO:0005509
Alju09g1559 552 SUPERFAMILY Protein kinase-like (PK-like) 98 369 IPR011009 -
Alju09g1559 552 CDD STKc_CAMK 101 358 - -
Alju09g1559 552 FunFam Calcium-dependent protein kinase 1 367 542 - -
Alju09g1559 552 ProSiteProfiles EF-hand calcium-binding domain profile. 438 473 IPR002048 GO:0005509
Alju09g1559 552 SUPERFAMILY EF-hand 398 539 IPR011992 -
Alju09g1559 552 ProSitePatterns EF-hand calcium-binding domain. 415 427 IPR018247 -
Alju09g1559 552 MobiDBLite consensus disorder prediction 42 70 - -
Alju09g1559 552 Gene3D Transferase(Phosphotransferase) domain 1 187 367 - -
Alju09g1559 552 ProSiteProfiles EF-hand calcium-binding domain profile. 509 544 IPR002048 GO:0005509
Alju09g1559 552 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Alju09g1559 552 Pfam Protein kinase domain 103 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1559 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Alju09g1559 552 ProSitePatterns EF-hand calcium-binding domain. 451 463 IPR018247 -
Alju09g1559 552 MobiDBLite consensus disorder prediction 42 78 - -
Alju09g1559 552 ProSitePatterns EF-hand calcium-binding domain. 522 534 IPR018247 -
Alju09g1559 552 FunFam calcium-dependent protein kinase 1 187 366 - -
Alju09g1559 552 ProSiteProfiles EF-hand calcium-binding domain profile. 474 508 IPR002048 GO:0005509
Alju09g1559 552 ProSiteProfiles Protein kinase domain profile. 101 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1559 552 ProSiteProfiles EF-hand calcium-binding domain profile. 402 437 IPR002048 GO:0005509
Alju09g1559 552 SMART serkin_6 101 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1559 552 Pfam EF-hand domain pair 407 467 IPR002048 GO:0005509
Alju09g1559 552 Pfam EF-hand domain pair 477 539 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1559 Alju-ChrAlju09 39569380 39575507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1559 87 551 EF-hand Containing Proteins AT4G23650 80.860 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Alju09g1559 Pkinase 1.7e-71 CL0016