Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1543 ATGGCATTTCTACGCATTTTCTATTTTTTTTGGCTACTAGATCTGATTCTCCGACAAGGAAATGCAGAGCCTGTTGAAGATAAGCGAGCTTTGCTTGATTTTGTGAGCCAGTTCTCTCACACTCGCCCTCTAAATTGGAATGAGAACTCTTCTGTGTGTACTAACTGGACTGGAGTCACTTGCAACGAAGATAAGTCCCGAGTAATAGCCGTTCGCCTGCCGGGAATTGGATTTCACGGAGCGATTCCACCCAACACAATTAGCCGCCTCTCGGCGCTGCAAATCGTGAGCCTCAGATCCAATTTTATCAGTGGGAGTTTCCCTTCTGATTTATCTAAGTTAAAAAACCTGTCTGTGATATATCTTCAATTTAACAACCTGTCCGGTTCTTTACCGGATTTCTCAGTCTGGAAGAACCTTACCATTGTCAATTTGTCCAATAATCGTTTCAATGGCAGCATTCCTTTCTCAATTTCTAATTTAAGTGAGCTTGCTGGTTTGAATCTCGCAAACAACTCGCTTTCTGGTGAAATTCCTGATGTCCAATTGCCCAGACTGCAACAGCTGAATTTGTCTCACAACAAGTTGAAGGGTACTGTGCCTAATTCTCTCCAGAGGTTTCCTATGTCAGCATTCGTCGGTAATAACATATCTTTTGGTAATTATCCTCACCTTTCTCCTGTACATCCTCCTTCTTCCAAGCCATCTTCAAAATCCAAGAAACATGGAGGTCTCCGGGAAGCAGCACTACTTGGAATTTCAATTGCTGTTGGTGTGCTTGCTCTTTTAGCATTTGGTTTTCTGATGTTTGTGTGCTTCTCAAGAAGCAGGGACGGAGATGGGTTCTCTGGGAAGTTGCAGAAGGGAGGAATGTCTCCAGAAAAGGAAGTTTCAAGAAATCAAGATGCGAATAATAAACTTGTTTTCTTTGAGGGATGTAACTATGCCTTTGACTTGGAGGATTTGTTAAGGGCTTCTGCTGAGGTACTGGGCAAGGGAACGTTTGGCACTGCATACAAGGCCATACTAGAGGATGCTTCCACAGTCGTCGTAAAGAGGCTGAAGGATGTAGCTGTTGGAAAGAGAGACTTTGAGCAACACATGGAGATTGTGGGAAGTCTTAAACATGATAATGTGGTTGAACTGAAAGCATATTACTATTCCAAGGACGAGAAATTGATGGTATATGATTATTACAGTCAGGGGAGCCTCTCTTCTTTACTTCATGGTAAAAGAGGAGAGGATAGGGTGGCATTAGATTGGGATTGTCGACTTAAAATAGCACTAGGCGCTGCAAGAGGGATTGCCCGTATCCACGCAGAGAATGGTGGAAAGATGGTGCATGGAAACATCAAATCTTCAAATATCTTTGTCAACTCGAAGCAGTATGGTTGTGTGTCTGATCTTGGGTTGGCCATGATAATGAGCTCACTTGCCCTCCCCATCTCACGCGCTTCTGGCTATCGAGCACCCGAAGTTACAGACACCAGAAAAGCAGCACAGCCTTCAGATATTTACAGTTTTGGAGTGGTGTTACTGGAGCTCCTGACTGGGAAATCCCCCATACTTACTACAGGTGGGGATGAGATAGTCCACTTGGTGAGGTGGGTCCATTCAGTGGTGCGAGAGGAGTGGACAGCAGAAGTGTTTGACCTGGAACTGATGAGATATCCAAATATAGAAGAAGAGATGGTGGAGATGTTACAGATAGCCATGGCATGTGTGACAAGGATGCCGGATCAGAGACCGAGGATCTCAGACGTTGTAAAGATGATAGAAAATGTGAGACAACTTGATATGGAGAACCGTCCACCACCTGATGAGAGCCAAGCTGAAAGTGGAACAACACCACCATCAGTGTTAGGTACTCATCACTAA 1878 0.4436 MAFLRIFYFFWLLDLILRQGNAEPVEDKRALLDFVSQFSHTRPLNWNENSSVCTNWTGVTCNEDKSRVIAVRLPGIGFHGAIPPNTISRLSALQIVSLRSNFISGSFPSDLSKLKNLSVIYLQFNNLSGSLPDFSVWKNLTIVNLSNNRFNGSIPFSISNLSELAGLNLANNSLSGEIPDVQLPRLQQLNLSHNKLKGTVPNSLQRFPMSAFVGNNISFGNYPHLSPVHPPSSKPSSKSKKHGGLREAALLGISIAVGVLALLAFGFLMFVCFSRSRDGDGFSGKLQKGGMSPEKEVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDASTVVVKRLKDVAVGKRDFEQHMEIVGSLKHDNVVELKAYYYSKDEKLMVYDYYSQGSLSSLLHGKRGEDRVALDWDCRLKIALGAARGIARIHAENGGKMVHGNIKSSNIFVNSKQYGCVSDLGLAMIMSSLALPISRASGYRAPEVTDTRKAAQPSDIYSFGVVLLELLTGKSPILTTGGDEIVHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMACVTRMPDQRPRISDVVKMIENVRQLDMENRPPPDESQAESGTTPPSVLGTHH 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1543 625 SUPERFAMILY Protein kinase-like (PK-like) 328 610 IPR011009 -
Alju09g1543 625 FunFam Probable inactive receptor kinase RLK902 24 182 - -
Alju09g1543 625 Gene3D Transferase(Phosphotransferase) domain 1 399 611 - -
Alju09g1543 625 FunFam pollen receptor-like kinase 1 293 398 - -
Alju09g1543 625 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 399 605 - -
Alju09g1543 625 MobiDBLite consensus disorder prediction 600 625 - -
Alju09g1543 625 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Alju09g1543 625 ProSitePatterns Protein kinases ATP-binding region signature. 330 361 IPR017441 GO:0005524
Alju09g1543 625 ProSiteProfiles Protein kinase domain profile. 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1543 625 Pfam Leucine rich repeat 139 196 IPR001611 GO:0005515
Alju09g1543 625 SUPERFAMILY L domain-like 38 207 - -
Alju09g1543 625 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Alju09g1543 625 MobiDBLite consensus disorder prediction 608 625 - -
Alju09g1543 625 Gene3D Ribonuclease Inhibitor 136 224 IPR032675 -
Alju09g1543 625 Pfam Protein kinase domain 327 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1543 625 PANTHER OS05G0588300 PROTEIN 7 603 - -
Alju09g1543 625 Gene3D Phosphorylase Kinase; domain 1 290 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1543 Alju-ChrAlju09 39346511 39349458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1543 16 620 Receptor kinase-like Gene Family AT4G23740 65.434 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju09g1543 Pkinase 1.6e-34 CL0016