Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1528 ATGGATGATCATCCTCCTAAACAGTCAACCTCTGAAGAAGTGAGCAGCATGGAGTGGGAGTTGGTAAAGATGAGTGAGCAAGAGGAAGATCTCATCCTCAGGATGTACAAGCTTGTCGGAAACAGGTGGGATTTGATAGCGGGACGCATTCCTGGTCGTAAAGCAGAAGAGATAGAGAGGTTCTGGATCATGAAACACTCCCAAGCTTTCTCTTCTATTTATAAGAACTCAACATCTCTAAAACCCTCCAAATAA 255 0.4392 MDDHPPKQSTSEEVSSMEWELVKMSEQEEDLILRMYKLVGNRWDLIAGRIPGRKAEEIERFWIMKHSQAFSSIYKNSTSLKPSK 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1528 84 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 23 69 - -
Alju09g1528 84 FunFam MYB-like transcription factor 23 65 - -
Alju09g1528 84 ProSiteProfiles Myb-like domain profile. 25 62 IPR001005 -
Alju09g1528 84 SUPERFAMILY Homeodomain-like 25 63 IPR009057 -
Alju09g1528 84 SMART sant 20 68 IPR001005 -
Alju09g1528 84 Gene3D - 24 84 - -
Alju09g1528 84 CDD SANT 23 62 IPR001005 -
Alju09g1528 84 Pfam Myb-like DNA-binding domain 23 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1528 Alju-ChrAlju09 39223955 39228768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1528 24 62 MYB Transcription Factor Family AT5G52600 64.103 3.77e-14 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju09g1528 Myb_DNA-binding 2.5e-08 CL0123