Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1521 ATGGAGGGATTTCAAGATAGAGATACTCAGCTTGAACCACATAACGTCGCCGATATAGGCTCATCTCTGTCCAATCTGATATTATCAGGTGGGACAAACCCCTTAGATTCTATTTTCTCTCACTGCCCTCAAATAAACACCACAGGCAACCCCATGTTTGATGCCTTTGGTTCGTGCGGTTTTGAGCCTATGGGCTCGTCGGTGTATCTTCGTCAAAGAGATATTCTGCAGAAATTCTACCAAGACAACCGAGTGAGTAGTTCATTCGGTGGTCTATCATCGAAAAATCAAAGTCTAAGCTACGCAGCAGCAACATCGTACTCATACATGAACCCGTGTAAAAAAAAACTATACAGGGGAGTGAGACAGAGACATTGGGGAAAATGGGTTGCAGAAATTAGACTTCCTCAGAACAGAATGAGAGTGTGGTTAGGCACTTATGAAACTGCAGAAGCTGCTGCTTATGCTTACGATCGTGCAGCATATAAGCTCCGAGGCGAATATGCTCGTTTGAATTTCCCGAATCTAAAGGACCCCAGTAAGTTAGGATTCGGAGACAGCTCCAGATTAAATGCTCTGAAAACCTCTGTAGATGCTAAAATTCAAGCTATCTGTCAAAAGGTGAAGAGAGAGAGAGCCAAGAAGAATAGCGCTAAGAAGCAGGCTAATCCGATTCCCAGCCCAGAACGGAGTGAGAAATCACAAAAGATTGAGTCTTCATCTTGTTCATCATCGTCGTTACCCTTATCTCCATTAGTTTTTGATGATAACTGGACAAACGAGTTCATTTCGCCGACGATTTCAGAGGACGGAATATGGAAGGGAGAGAACTCGCCGTCCGCCGTGTCAACTGATTTTCCGACAATGGTAACAACAGAGGAATCAGAATTCGAAGGTTGTTCCCTGGCGAGGATGCCTTCCTTTGATCCCGAGTTAATCTGGGAAGTCCTTGCCAATTAA 960 0.4437 MEGFQDRDTQLEPHNVADIGSSLSNLILSGGTNPLDSIFSHCPQINTTGNPMFDAFGSCGFEPMGSSVYLRQRDILQKFYQDNRVSSSFGGLSSKNQSLSYAAATSYSYMNPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDSSRLNALKTSVDAKIQAICQKVKRERAKKNSAKKQANPIPSPERSEKSQKIESSSCSSSSLPLSPLVFDDNWTNEFISPTISEDGIWKGENSPSAVSTDFPTMVTTEESEFEGCSLARMPSFDPELIWEVLAN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1521 319 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 61 317 - -
Alju09g1521 319 Pfam AP2 domain 118 167 IPR001471 GO:0003700|GO:0006355
Alju09g1521 319 MobiDBLite consensus disorder prediction 210 247 - -
Alju09g1521 319 SMART rav1_2 117 180 IPR001471 GO:0003700|GO:0006355
Alju09g1521 319 PRINTS Ethylene responsive element binding protein signature 118 129 IPR001471 GO:0003700|GO:0006355
Alju09g1521 319 PRINTS Ethylene responsive element binding protein signature 140 156 IPR001471 GO:0003700|GO:0006355
Alju09g1521 319 Gene3D AP2/ERF domain 117 175 IPR036955 GO:0003700|GO:0006355
Alju09g1521 319 ProSiteProfiles AP2/ERF domain profile. 117 174 IPR001471 GO:0003700|GO:0006355
Alju09g1521 319 SUPERFAMILY DNA-binding domain 117 174 IPR016177 GO:0003677
Alju09g1521 319 FunFam Ethylene-responsive transcription factor 2 116 175 - -
Alju09g1521 319 CDD AP2 116 176 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1521 Alju-ChrAlju09 39183318 39184277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1521 16 319 AP2-EREBP Transcription Factor Family AT1G64380 48.810 8.99e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju09g1521 AP2 4e-13 CL0081