Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1506 ATGATCACGCTCGGAGACGCCGGAGATTTTGTCGTCAAAGCGATTTCCTTGAAGGACCACCAAGTTTTGATGAACGACCCAAATAGCTGCCTTCCCTTACGATTCCTCAACGGCGACTTGGACCTTCGTCTTGAAGGTGCGCCTTTCCAATGGATCACCAATTACGTTGACTTCGCCCACGTTGACTTTCTCAAATGTAGGGCCCCACTGCCACGTAACTCCCTTCGGCTCGCTCACAAGAAAATACCTTGCCTCAGCGGAACCGGCGCCGATAACTTCACGGTGGTCGCCGTTTGGTTGGATCCTTCCTTTCCGACAACATCCACGCCGTTCCCTCCAGATCAATGCCATCATATTTCCTCGACTTCACTTCCGGTTGAGGGTTTCGAACCGGAGCAATTATGGAACCACCTTTACTCCGATCTTCGGCTCAAATGGAACAACTGTATGTATCCGGATCTTGACGATGAAGACGGTGGTACTGCTTGCTATAACAATGTTCCAGACCCAGCTTATTTTCTTGTTTTGCTTGACTGCTGCTGCATACGTACTGATGAAAACGAATCGTTTTGCGCGCATGGAGAGCCTGCAAGTTCCAAATTTTACAAAATATTAGCGGTGGGAGTGGCTGGAGCATTATTGTTTTGTGTGGCGGGACTTGCACGCTTAATGGGGGCTAAGGTGGAGCGGCCGGACGGTGGACGGTCGAGGATGGACGGATCAGAGTCGGATAGAAGCACTACGGCGGAATCAGTTGACGTGGGAATGGGGCTTGATGAGTCAACCATTGAACAGTATCCGACAACACAAGTTGGTCAAAGTGGAAGGTTGCCCAATCCGGCAGGTGACAACGTTTGCTCTATATGTCTGAGCGAGTATGAGCCGATGGACACATTAAGAACTATTCCTCACTGTGATCACTATTTTCATGCCCATTGTATAGATAGCTGGCTCAAGAAGAAGGGCACGTGCCCTTTGTGTCGTTATCTTCCCCATGCTTCTACTTCATTGTCCCTCTCTTCCTCGGATTCTCGTCAATTGTTGATCCCCACTTAG 1056 0.4962 MITLGDAGDFVVKAISLKDHQVLMNDPNSCLPLRFLNGDLDLRLEGAPFQWITNYVDFAHVDFLKCRAPLPRNSLRLAHKKIPCLSGTGADNFTVVAVWLDPSFPTTSTPFPPDQCHHISSTSLPVEGFEPEQLWNHLYSDLRLKWNNCMYPDLDDEDGGTACYNNVPDPAYFLVLLDCCCIRTDENESFCAHGEPASSKFYKILAVGVAGALLFCVAGLARLMGAKVERPDGGRSRMDGSESDRSTTAESVDVGMGLDESTIEQYPTTQVGQSGRLPNPAGDNVCSICLSEYEPMDTLRTIPHCDHYFHAHCIDSWLKKKGTCPLCRYLPHASTSLSLSSSDSRQLLIPT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1506 351 Pfam Ring finger domain 285 328 IPR001841 -
Alju09g1506 351 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 329 IPR046948 -
Alju09g1506 351 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 244 332 IPR013083 -
Alju09g1506 351 SUPERFAMILY RING/U-box 282 331 - -
Alju09g1506 351 MobiDBLite consensus disorder prediction 231 246 - -
Alju09g1506 351 ProSiteProfiles Zinc finger RING-type profile. 286 328 IPR001841 -
Alju09g1506 351 SMART ring_2 286 327 IPR001841 -
Alju09g1506 351 MobiDBLite consensus disorder prediction 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1506 Alju-ChrAlju09 39003818 39005590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1506 2 331 C3H Transcription Factor Family AT2G25410 30.205 3.87e-31 119