Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1484 ATGGACGCTGAAATCAAAGGACGAATCGAGACCGCTGTTCGGAAGATTTTGCAGGAATCAAACATGGACGAGGTCACCGAATCCAAAATCAGGAAGCAGGCCGCCAAAGAACTCGACCTCGACCTGTCGCAGCCTCAACACAAAGCCTTCGTGAAGCAGGTTGTGGAGTCTTTTATTCAGGAAAAGCAAGAGGAGCAGGAGGAAGAAGTAGAAAATTCGCAAGAGGAAACTTATCAGGACCAGGAGTACGATGATGAGGGCAATCCTATTATCTGCAAGCTTTCAGCTCAGAGAAGGGTGACGATTCAAGAATTCAGAGGGAAAACACTGGTCTCTATCAGGGAGTACTATAGAAAGGACGGTAAAGAACTTCCTTCTTCGAAAGGAATAAGTTTGACAGAAGAGCAGTGGTCAGCCTTGAAGAAGAATATACCTGCCATAGAAAAAGCCATTCAGAAACTGGAGTCGAACATGTGA 477 0.457 MDAEIKGRIETAVRKILQESNMDEVTESKIRKQAAKELDLDLSQPQHKAFVKQVVESFIQEKQEEQEEEVENSQEETYQDQEYDDEGNPIICKLSAQRRVTIQEFRGKTLVSIREYYRKDGKELPSSKGISLTEEQWSALKKNIPAIEKAIQKLESNM 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1484 158 Gene3D - 5 63 - -
Alju09g1484 158 Gene3D Transcriptional Coactivator Pc4; Chain A 81 158 IPR009044 GO:0003677|GO:0006355
Alju09g1484 158 Pfam DEK C terminal domain 8 59 IPR014876 -
Alju09g1484 158 SUPERFAMILY DEK C-terminal domain 8 60 - -
Alju09g1484 158 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 3 60 IPR014876 -
Alju09g1484 158 PIRSF RNA_polymII_KELP 1 158 IPR017415 -
Alju09g1484 158 MobiDBLite consensus disorder prediction 62 83 - -
Alju09g1484 158 Pfam Transcriptional Coactivator p15 (PC4) 92 143 IPR003173 GO:0003677|GO:0006355
Alju09g1484 158 Coils Coil 56 76 - -
Alju09g1484 158 MobiDBLite consensus disorder prediction 62 85 - -
Alju09g1484 158 FunFam RNA polymerase II transcriptional coactivator KELP 81 157 - -
Alju09g1484 158 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 5 156 IPR045125 GO:0003713|GO:0060261
Alju09g1484 158 SUPERFAMILY ssDNA-binding transcriptional regulator domain 91 154 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1484 Alju-ChrAlju09 38864636 38866487 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Alju09g1484 DEK_C 7e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1484 09 38864636 38866487 Alju09g1484 09 38864636 38866487 ECH