Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1476 ATGGGCATCCCTCAAACTCAAGCTCCATCCACATCTCTAACTCTGTATCCACAAGAACTTCAGTTAAAACTATACCAAGCCTTCATTTTCTCAATTCCAATCCTATTTTCCATCATTCTCTTCCTCTTGTTTTATTTGTTCTACCTCAAGCGCAGGGCTTCCTCTCTCTCTTCCCCTCCTCACTTTCTTCCCAACACTGCTCCTTCAACTGCCAATCATTCCACTGGATTTCAATTGACGCTTCGATTCCTTGACACTCTTCCAAAAGTTTTGTTTGATGAAGAATTGAAAGCAAGAGATTCACAATGTTGTGTATGTCTGGGAGAGTTTGAGATAAAAGAAGAGGTATTACAGATCCCTCAGTGCAAGCATGTATTCCACAGAGATTGCATTTACCATTGGCTCTATTCACACTCCACTTGTCCACTGTGTAGATGTTGTATCATCCCTCCCACCAAGTTTCTGAATCCACCAACCCTCCATCCTCCTCCTCCTCCTCCTTTTGCAGATGAAGCTGCTTCTGCTTCTTCCATCTAA 537 0.4283 MGIPQTQAPSTSLTLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPPHFLPNTAPSTANHSTGFQLTLRFLDTLPKVLFDEELKARDSQCCVCLGEFEIKEEVLQIPQCKHVFHRDCIYHWLYSHSTCPLCRCCIIPPTKFLNPPTLHPPPPPPFADEAASASSI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1476 178 CDD RING-H2_EL5-like 102 145 - -
Alju09g1476 178 Pfam Ring finger domain 102 145 IPR001841 -
Alju09g1476 178 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 27 155 - -
Alju09g1476 178 SUPERFAMILY RING/U-box 81 158 - -
Alju09g1476 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 150 IPR013083 -
Alju09g1476 178 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Alju09g1476 178 SMART ring_2 103 144 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1476 Alju-ChrAlju09 38810739 38812176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1476 3 150 C3H Transcription Factor Family AT4G10150 42.763 1.37e-36 125