Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1464 ATGACAGAAGTAGCGAGCTCAGTGGTACACGAGGTGCTGGGACGACGGATTCAGGATGTGGATCAGCCGATTATCGATTATATTATCAACGTTCTCGCAGATGAGGACTTTGATTTTGGAGATGATGGAGAAGGCGTCTTCGATTTTCTCGGGGAGCTACTCGTTAGTGCCGCTTGCGTCGACGACTACTCTGAATGTCGCACTGTATGTAGCAAATTGTCTGAAAAATTTGGAAAGCATGGGTTTGTCAAAGCCAAACCAACCGTGCGAAGCCTTGCAGCACCCGTCAGAATGGATGACGGAATGGATGATGGGGTAGCTCCTAAGAAGAAGCGTGAGCCTACTGATGGTCCTTTGCTAACTGAACGTGACCGTATAAAGCTAGAAAGAAGAAAGAGGAAGGACGAACGCCAAAGGGAGGCACAGTACCAAATGCATCTAGCAGAAATGCAAGCAGCCCGAGAAGGGATGCCCGTTGTATGTGTTAGGCATGATAATAGTGGTGGACCAGTTGTCAAGGACATTCACTTGGAGAACTTCAATATTTCTGTTGGTGGCCGTGATCTCATTGAGGATTGTTCAATCACACTCTCATTTGGAAGGCATTATGGCCTTATTGGAAGAAATGGTACTGGGAAAACAACATTCCTCAGGCATATGGCTTTGCATGCCATTGATGGTATACCAAATAATTGTCAGATATTGCATGTGGAACAAGAGGTAGTTGGTGACAACACAACAGCCTTGCAGTGTGTTCTCAATTCGGATATTGAGAGAACTCAACTTCTGGAGGAAGAAGCCCGATTACTTGCCCAACAGAGAGAGTTGGAGTCTGGGGATGTAACTATAAAGAGCAATGATGCCATTTCTCAGAGACTTGAGGAGATCTACAAGAGGCTTGAGTTCATTGATGCTTACTCTGCAGAGGCTCGGGCAGCTACAATACTTGCAGGTTTAAGCTTCTCTCCTGAGATGCAAAAGAGGGCGACAAAAACTTTCTCAGGAGGATGGCGGATGCGAATAGCTCTTGCTCGTGCACTATTTATAGAACCTGACTTGTTGCTTCTTGATGAACCTACGAACCATCTTGATCTTCATGCTGTCTTATGGCTGGAATCTTACTTGGTTAAGTGGCCAAAAACGTTCATAGTTGTTTCTCATGCTAGAGAATTTTTAAACACGGTGGTGACTGACATAATTCACCTACAAGCTAAGAAGTTGACTACTTATAAAGGGAACTATGATAATTTTGAGAAGACTCGAGAAGAACAGCTTAAAAACCAGCAAAAAGCAGTTGAGGCAAATGAACGTACAAGGGCTCATATGCAGTCTTTCATTGACAAGTTCCGTTATAATGCCAAGAGGGCGTCACTTGTTCAATCAAGAATCAAGGCTTTGGACCGGATTGGTCGTGTGGATGAAATTATCAATGACCCTGACTACAAGTTTGAGTTCCCAACTCCAGATGATAGACCTGGCGCACCAATAATAAGTTTTAGTGATGCATCATTTGGTTACCCTGGGGGCCCAATTCTATTTAAGAATTTGAATTTCGGGATTGATCTTGACAGCCGTATTGCAATGGTTGGACCCAATGGGATTGGCAAATCTACCATACTTAAGTTAATTGCAGGGGAACTACAACCCACTTCTGGGACAGTTTTTCGTTCCGCCAAGGTACGTATAGCAGTCTTCAGCCAGCATCACGTTGATGGACTAGACTTATCGTCAAATCCCCTTTTATACATGATGCGCTGCTATCCTGGTGTTCCTGAACAGAAGCTTCGAGCTCACTTGGGCTCTTTTGGTGTAACTGGAAATCTTGCTCTTCAGCCTATGTATACACTCTCAGGGGGACAAAAGAGCAGGGTTGCATTTGCAAAGATAACTTTCAAGAAACCACACATAATATTGCTTGATGAACCTTCCAATCACCTGGACTTGGATGCTGTTGAGGCGCTAATTCAAGGTCTTGTGATGTTCCAAGGAGGCATTCTAATGGTGAGTCACGATGAGCACCTAATATCTGGAAGCGTGGACGAGCTATGGGTTGTATCCCAAGGAAGAGTGAGCCCATTCCAAGGCACCTTCCAAGACTATAAGAAGATACTCCAGTCATCATAG 2124 0.4449 MTEVASSVVHEVLGRRIQDVDQPIIDYIINVLADEDFDFGDDGEGVFDFLGELLVSAACVDDYSECRTVCSKLSEKFGKHGFVKAKPTVRSLAAPVRMDDGMDDGVAPKKKREPTDGPLLTERDRIKLERRKRKDERQREAQYQMHLAEMQAAREGMPVVCVRHDNSGGPVVKDIHLENFNISVGGRDLIEDCSITLSFGRHYGLIGRNGTGKTTFLRHMALHAIDGIPNNCQILHVEQEVVGDNTTALQCVLNSDIERTQLLEEEARLLAQQRELESGDVTIKSNDAISQRLEEIYKRLEFIDAYSAEARAATILAGLSFSPEMQKRATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIIHLQAKKLTTYKGNYDNFEKTREEQLKNQQKAVEANERTRAHMQSFIDKFRYNAKRASLVQSRIKALDRIGRVDEIINDPDYKFEFPTPDDRPGAPIISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPTSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLVMFQGGILMVSHDEHLISGSVDELWVVSQGRVSPFQGTFQDYKKILQSS 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1464 707 Pfam ABC transporter 400 480 IPR032781 -
Alju09g1464 707 Pfam ABC transporter 514 644 IPR003439 GO:0005524
Alju09g1464 707 CDD ABCF_EF-3 175 406 - -
Alju09g1464 707 ProSitePatterns ABC transporters family signature. 616 630 IPR017871 GO:0005524|GO:0016887
Alju09g1464 707 MobiDBLite consensus disorder prediction 102 118 - -
Alju09g1464 707 FunFam ATP-binding cassette sub-family F member 3 459 707 - -
Alju09g1464 707 Gene3D - 171 460 IPR027417 -
Alju09g1464 707 SMART AAA_5 199 406 IPR003593 GO:0016887
Alju09g1464 707 SMART AAA_5 522 689 IPR003593 GO:0016887
Alju09g1464 707 CDD ABCF_EF-3 497 689 - -
Alju09g1464 707 Gene3D - 461 707 IPR027417 -
Alju09g1464 707 FunFam ABC transporter F family member 3 127 442 - -
Alju09g1464 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 433 IPR027417 -
Alju09g1464 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 479 698 IPR027417 -
Alju09g1464 707 ProSitePatterns ABC transporters family signature. 333 347 IPR017871 GO:0005524|GO:0016887
Alju09g1464 707 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 175 429 IPR003439 GO:0005524
Alju09g1464 707 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 156 706 - -
Alju09g1464 707 MobiDBLite consensus disorder prediction 98 118 - -
Alju09g1464 707 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 497 706 IPR003439 GO:0005524
Alju09g1464 707 Pfam ABC transporter 191 361 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1464 Alju-ChrAlju09 38656317 38668988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1464 496 691 Calmodulin-binding Proteins AT2G36910 29.730 4.90e-10 61.2