Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1462 ATGTCTGCTTCTCGCATCGCAGAATCTTCACCCGCTTGTTCTTTGGACCCTAACGTCGTAAAACCCTCAACCCCACTTGTCTCCTTCCTCGAACGTGTACAGGAAACCGCTTTAGCCACTTTGGGCAATTCTACATTCGATCCTAAAACATATGTGGACTTGCCCTTGAAGTTCAACTTGTCTGAGACAGAGCAGGCATTTAATAAGCTTGCTAGGTCTGCCAATGGCTCTGTATCAGCAAATGTTTTGAATGGTTTTATAGAGAGATACTTTGATGGTGCAGGGGACGATGTGGTGTACCACGAACCAGAGGATTACGTGGAAGAGCCAGAGGGGTTCTTGCCCAAAGTTGAGCATCCAGAGGTGAGGGCATGGGCTTTGAAGGTCCATTCCCTTTGGAAAAACTTGAGCCGCAGAGTATCAATTGGGGTTAAAAGCCATCCTCATTTGCATACTCTTCTTCCTCTTCCTGCTTCTTTCGTTATTCCTGGCTCCCGCTTTCATGAGGTTTATTACTGGGATTCCTACTGGGTTATCAGGGGCTTACTGGTGAGTAAAATGTACAAGACAGCCACGGCAATCGTGACTAATCTTATTTCTTTAATAGAGGAATATGGGTTTGTGCTTAATGGTGCAAGAGCCTACTACACCAACAGAAGCCAACCTCCCCTTTTAAGTTCTATGATTTATGAGATTTACAATAGCACTGGTGATATAGAATTGGTGAAAAGATCGCTTCCCGCGCTACGGAAAGAATACGAATTTTGGAATTCAGACATACATAGGGTGAACATTGTGGATGCTCAAGGTTGCACTCACACCTTAAATCGGTATTATGCAATGTGGAATAAACCTAGGCCAGAGTCTTCAATAATCGACAAGGCATTTGCTTCCAAGCTTTTGAATGTTTCAGAAAAACAGCACTTTTACCGTGCAGTGGCTTCAGCTGCTGAATCAGGATGGGATTTTAGTACAAGATGGATGAGAGATCCGTCAAATTTTACCACATTGGCTACAACAGCAGTAATACCTGTTGATCTAAATGCTTATATACTTGGGATGGAACTTAATATTGCATTTTTCGCCAAAGTTACCAGAGATAATAGTACTGCTCAGCACTTCCTGCAACTAGCTGATCATAGAAAGAAGGCTTTCAATTCAGTTTTTTGGAACATAAACATGAAACAATGGCTTGATTACTGGCTCACAAGTAGTACATGTCAGGAAGCTCAAGTCTGGGATGCTCACCAGCAGAATCAAAATATATTTGCTTCCAATTTTGTTCCTTTGTGGATGGAACCATTTTATTCAGACTCTTCAGTTGTGGATAACGTTATTGAAAGTCTCAAAACTAGTGGGCTGCTTCGTACTGCTGGAATCGCAACCTCTTTGAAGAATTCTGGACAACAGTGGGATTTCCCAAATGGCTGGGCCCCACTTCAGCATATGATAGTAGAAGGTCTAGTGAAATCTGGGTTGAAAGAAGCAGCTTCATTAGCAGAAGAAATTGCAAGGAGATGGATCACAACCAACTATATTGCCTTCAAGAAATCAGGGTTCATGTATGAAAAATATAATGTGGAGCATTGTGGAGATTTTGGAGGTGGTGGTGAATATGCATCTCAGACTGGTTTTGGGTGGTCGAATGGAGTGGTGCTTGCTTTGTTGGAGGAGTTTGGATGGCCTCGAGATCTCAATATTAACTGCTAA 1710 0.4257 MSASRIAESSPACSLDPNVVKPSTPLVSFLERVQETALATLGNSTFDPKTYVDLPLKFNLSETEQAFNKLARSANGSVSANVLNGFIERYFDGAGDDVVYHEPEDYVEEPEGFLPKVEHPEVRAWALKVHSLWKNLSRRVSIGVKSHPHLHTLLPLPASFVIPGSRFHEVYYWDSYWVIRGLLVSKMYKTATAIVTNLISLIEEYGFVLNGARAYYTNRSQPPLLSSMIYEIYNSTGDIELVKRSLPALRKEYEFWNSDIHRVNIVDAQGCTHTLNRYYAMWNKPRPESSIIDKAFASKLLNVSEKQHFYRAVASAAESGWDFSTRWMRDPSNFTTLATTAVIPVDLNAYILGMELNIAFFAKVTRDNSTAQHFLQLADHRKKAFNSVFWNINMKQWLDYWLTSSTCQEAQVWDAHQQNQNIFASNFVPLWMEPFYSDSSVVDNVIESLKTSGLLRTAGIATSLKNSGQQWDFPNGWAPLQHMIVEGLVKSGLKEAASLAEEIARRWITTNYIAFKKSGFMYEKYNVEHCGDFGGGGEYASQTGFGWSNGVVLALLEEFGWPRDLNINC 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1462 569 Gene3D - 28 565 IPR012341 GO:0005975
Alju09g1462 569 Pfam Trehalase 46 560 IPR001661 GO:0004555|GO:0005991
Alju09g1462 569 PRINTS Glycosyl hydrolase family 37 signature 310 327 IPR001661 GO:0004555|GO:0005991
Alju09g1462 569 PRINTS Glycosyl hydrolase family 37 signature 342 359 IPR001661 GO:0004555|GO:0005991
Alju09g1462 569 PRINTS Glycosyl hydrolase family 37 signature 275 292 IPR001661 GO:0004555|GO:0005991
Alju09g1462 569 PRINTS Glycosyl hydrolase family 37 signature 385 401 IPR001661 GO:0004555|GO:0005991
Alju09g1462 569 PRINTS Glycosyl hydrolase family 37 signature 543 556 IPR001661 GO:0004555|GO:0005991
Alju09g1462 569 PRINTS Glycosyl hydrolase family 37 signature 463 479 IPR001661 GO:0004555|GO:0005991
Alju09g1462 569 PRINTS Glycosyl hydrolase family 37 signature 205 223 IPR001661 GO:0004555|GO:0005991
Alju09g1462 569 ProSitePatterns Trehalase signature 2. 470 479 IPR018232 GO:0004555|GO:0005991
Alju09g1462 569 PANTHER TREHALASE 21 565 IPR001661 GO:0004555|GO:0005991
Alju09g1462 569 SUPERFAMILY Six-hairpin glycosidases 40 562 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1462 Alju-ChrAlju09 38631416 38641082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1462 16 569 Trehalose Biosynthesis Gene Families AT4G24040 58.602 0.0 660
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1462 09 38631416 38641082 Alju09g1462 09 38631416 38641082 ECH