Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1455 ATGGGTGAACCTCGGATGGGTATAAGGATGTCTGCTTTCTTGCGGAATCGAAATTCTTTCATGGATTTTGGATCCTCGGTTTTGTCCTTCGTTGGATGTCGATTCCACTTTTGTTCGACGTTCGATTCCTATTCAGTCGCTTGACGTTTTGGTTCTTTTAAATCCGTGTTAGCTATGGATTCCGGTGCCTGTTTGTCTGATGGCAAGTTTGAGAACGATGATGCTGATGTTGTGGAAAAGGATCCTACTGGACGTTACATTCGGTATGATGATATGTTGGGCAGAGGAGCATTCAAGACTGTGTATAAGGCATTTGATGAAGTTGATGGGATGGAAGTCGCCTGGAGCAAAGTGGATATTGTTCACGTTTTGCAGTCTCCACTTCAATTGGAAATGTTATATTCTGAGGTCCATCTCCTAAAGTCATTGCAACATGAAAAAATCCTCAAGTGCTATAATTCTTGGGTGGACGATAAAACCAAGACTATCAACATGATAACTGAGTTATTCGTCTCCGGGAGTTTGAGGCAATATCGAAGAATGCATAAGAATGTTGAATTGAAGGCCATCAAGAACTGGGCCAGGCAAATTCTTCAAGGTTTATGCTATTTGCACAGCAACAATCCTCCTATCATCCACAGAGATTTGAAATGTGATAATATTTTCATTAATGGTAATACTGGAGAAGTTAAGATTGGAGATCTTGGATTGGCAGCTGTCCTACAGCAACCTACGGCACACACTGTCATTGGGACACCAGAATTCATGGCTCCTGAGCTTTATGATGAAGAGTACAATGAACTTGTTGACATATATTCTTTCGGTATGTGCATGTTAGAAATGATAACCTGTGAGTACCCATACAGCGAATGCAAAAATCATGCACAAATATACAAGAAAGTTACCTCTGGAATAAAGCCTGCCGCTCTTGGTAAAGTGAATGATCCCCAAGTGAGGCAATTCATAGAGAAATGTTTAGTTCCAGCATCTATGAGATTGCCTGCATCCGAGCTATTGAAGGATCCATTTCTTGCTACTGATGGCATGAAGGAGGTCAAACATGCACTGCTGTTACCCATTCACAAGACACTGCCAACAACTGAGCCACATCCTACGGAGATAGACCAAAGTGTGAAGGATGTTTTGCCTGGCTCCTGTTTGAAAGTTACTGAAGAAACGCCTCAAATATTAACTCTAGAATTCCCTAGGACAAGTGAGGGTACTGGATTCAGGTTACGAGGGGAGAAAAATGCTTCAGACAAAACAATTTCATTAACTCTGCGCATTGCTAAGGCAAATGGTCCTGCAAAGAATATCGAATTTCCTTTCTATCTTGATTCTGATACAGCAATTTCAATTGCTGAGGAGATGGTAGAAAGTCTGAATCTCCCTGCCGAGGACGAGAGTGTTATTGCTGAACTGATACAAACCATGATTGTCAGGCTTGCTCCTAGATGGAGAGTGTCACCTCAACAACTATCGTCTGGAGCAGATTGTTTGGATGGCAATTCTCATGTAGTTTTAAATGGGGGATCACCTTTTAGGCGCCATGGTGATGAGGATCTTGTTAACTCACAGGTTCTTGAGGAAGATCAAGAGAAACATGAATCAATCATGCCAGGCATTTCAGCAGAGGATGCGATTGCAGTCGTCTCAGATGCTAAACATTTACATCCTGATTATACTTCCTTTGACGAAGACTCTGACGGTTCCATTTCCAAAAGGTCCAATTCAGACTTCAGGTTATCTGATCAAGATGAATGCAATTGGGAGGGTGATGGCGGTAGATCTGATAGCTCAGGGAACTCAACTATCACGTTTACAGACTCGTGTGGCGATGAGCCCAAGAATTCAGACCTGTCAAGCATCAATTATCTCTCCCTCGCAGACAAAGATCAATTCGACCAGCTGCCACCGGAGCATGATGCAATAAATACACAGTACCAACAATACTTTCTTGAACTTGCGAAGATGAGGGAGGATGCAATAGAGGACACAAAAAGGAGATGGATTACTAGGAAGAAAATACCAGTAATGTGA 2040 0.4225 MGEPRMGIRMSAFLRNRNSFMDFGSSVLSFVGCRFHFCSTFDSYSVAXRFGSFKSVLAMDSGACLSDGKFENDDADVVEKDPTGRYIRYDDMLGRGAFKTVYKAFDEVDGMEVAWSKVDIVHVLQSPLQLEMLYSEVHLLKSLQHEKILKCYNSWVDDKTKTINMITELFVSGSLRQYRRMHKNVELKAIKNWARQILQGLCYLHSNNPPIIHRDLKCDNIFINGNTGEVKIGDLGLAAVLQQPTAHTVIGTPEFMAPELYDEEYNELVDIYSFGMCMLEMITCEYPYSECKNHAQIYKKVTSGIKPAALGKVNDPQVRQFIEKCLVPASMRLPASELLKDPFLATDGMKEVKHALLLPIHKTLPTTEPHPTEIDQSVKDVLPGSCLKVTEETPQILTLEFPRTSEGTGFRLRGEKNASDKTISLTLRIAKANGPAKNIEFPFYLDSDTAISIAEEMVESLNLPAEDESVIAELIQTMIVRLAPRWRVSPQQLSSGADCLDGNSHVVLNGGSPFRRHGDEDLVNSQVLEEDQEKHESIMPGISAEDAIAVVSDAKHLHPDYTSFDEDSDGSISKRSNSDFRLSDQDECNWEGDGGRSDSSGNSTITFTDSCGDEPKNSDLSSINYLSLADKDQFDQLPPEHDAINTQYQQYFLELAKMREDAIEDTKRRWITRKKIPVM 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1455 679 MobiDBLite consensus disorder prediction 595 613 - -
Alju09g1455 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Alju09g1455 679 FunFam Probable serine/threonine-protein kinase WNK1 72 168 - -
Alju09g1455 679 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 424 479 IPR024678 GO:0004674|GO:0005524
Alju09g1455 679 CDD STKc_WNK 85 344 - -
Alju09g1455 679 Gene3D - 421 510 - -
Alju09g1455 679 Gene3D Transferase(Phosphotransferase) domain 1 170 351 - -
Alju09g1455 679 MobiDBLite consensus disorder prediction 559 613 - -
Alju09g1455 679 MobiDBLite consensus disorder prediction 559 593 - -
Alju09g1455 679 Pfam Protein kinase domain 91 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1455 679 Gene3D Phosphorylase Kinase; domain 1 71 168 - -
Alju09g1455 679 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Alju09g1455 679 SUPERFAMILY Protein kinase-like (PK-like) 89 391 IPR011009 -
Alju09g1455 679 FunFam probable serine/threonine-protein kinase WNK9 170 349 - -
Alju09g1455 679 ProSiteProfiles Protein kinase domain profile. 87 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1455 679 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 71 566 - -
Alju09g1455 679 SMART serkin_6 87 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1455 Alju-ChrAlju09 38583528 38586424 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1455 73 678 MAP Kinase Kinase Kinase AT5G41990 51.718 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Alju09g1455 Pkinase 2e-49 CL0016