Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1454 ATGATAACTGAGTTATTCGTCTCTGGGAGTTTGAGGCGATATCGAACAATGCATAAGAATGTTGAATTGAAGGCCATCAAGAACTGGGCAAGGCAAATTCTTCAAGGTTTATGCTATTTGCACAGCCACAATCCTCCTATCATCCACAGAGATTTGAAATGTGATAATATTTTCATTAATGGTAATACTGGAGAAGTTAAGGTTGGAGATCTTGGATTGGCAGCTGTCTTACAGCAACCTACTGCACACACTGTTATTGGGACACCAGAATTCATGGCTCCTGAGCTTTATGATGAAGAGTATAATGAGCTTGTTGACATATATTCTTTTGGTATGTGCATGTTAGAAATGATAACCTGTGAGTACCCATACAGCGAATGCAAAAATCACGCACAGATATATAAGAAAGTTACCAATGGAATAAAGCCTGCTGCTCTTGGTAAAGTGAGCGATCCCCAAGTGAGGCAATTCATAGAGAAATGTTTAGTTCCAGCATCCATGAGATTGCCCGCATCTGAGCTATTGAAGGATCCATTTCTTGCTACTGACGACATGAAGGAGGTCAACCATGAAGTTCAGTTGCCCATTCACACGACACCGCCAACAACTGAGCCATGTCCTATGGAGATAAAGCGAACTGTCAAGGATGTTTTGCCTGGCTCCTGTTTGAAAGTTAATGAAGAAACTCCTCAAATATTAACTTTAGAACTCCCTAGGACGAATAAGGGTACTGAATTCAGGCTACGAGGGGAGAAAAATGCTTCAGACAAAATTTCACTAACTCTGCGCATTGCTAAGGCAAAAGGTTCTGCGCAGAAAATCGAGTTTTCGTTCTATCTTGAATCTGATACAGCAATTTCAATTGCTGAGGAGATGGTAGAAAGTCTGAATCTCTCTGCTGAGGAAGCGAGTGTTATCGCCGAACTGATACACAACATGATTGTCAGGCTTGTTCCTAACTGGGGAGGGTCACAACAACAATTATCATCTGGAGCAGATTGTTTGGATGGCAATTCTCTTGTAGTTGTAAATGGGGGATCACCTAGTGATGAGGATCTTGTCAACTCACAGGTTCTTGAGGAAGATCAAGAGAAACATGAATCAATCATTTCTGCTGAGATTACAGTCACCTCAGATGCTAAATCTGATAATAGTCTCTTTGAAGGAGTCTCTGAAGCTTCGATTGCCCAAAGGTCCAATTCAGACTTCTGGTTATCTAATCAAGATGAAGGCAATAGGGAAGCTAATGGCCGTGGATCTGATAGCTCGATGAACTCGACTATTTCATTTATAGATTCATGTGGGGATGAGCCCAAGGATTTAGACCTGTCAAGCATCAACTATCTTTATTCGATGTCAATTGATTTTGGTTCCTTGGAATCAGCCTTGTATTTTTTCATTTTGTCATTGTCAATACCTTGGAATGCTATGATTACAATTTCTCAATAA 1449 0.4065 MITELFVSGSLRRYRTMHKNVELKAIKNWARQILQGLCYLHSHNPPIIHRDLKCDNIFINGNTGEVKVGDLGLAAVLQQPTAHTVIGTPEFMAPELYDEEYNELVDIYSFGMCMLEMITCEYPYSECKNHAQIYKKVTNGIKPAALGKVSDPQVRQFIEKCLVPASMRLPASELLKDPFLATDDMKEVNHEVQLPIHTTPPTTEPCPMEIKRTVKDVLPGSCLKVNEETPQILTLELPRTNKGTEFRLRGEKNASDKISLTLRIAKAKGSAQKIEFSFYLESDTAISIAEEMVESLNLSAEEASVIAELIHNMIVRLVPNWGGSQQQLSSGADCLDGNSLVVVNGGSPSDEDLVNSQVLEEDQEKHESIISAEITVTSDAKSDNSLFEGVSEASIAQRSNSDFWLSNQDEGNREANGRGSDSSMNSTISFIDSCGDEPKDLDLSSINYLYSMSIDFGSLESALYFFILSLSIPWNAMITISQ 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1454 482 Gene3D Transferase(Phosphotransferase) domain 1 6 188 - -
Alju09g1454 482 FunFam probable serine/threonine-protein kinase WNK9 6 185 - -
Alju09g1454 482 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 374 - -
Alju09g1454 482 Pfam Protein kinase domain 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1454 482 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1454 482 SUPERFAMILY Protein kinase-like (PK-like) 1 213 IPR011009 -
Alju09g1454 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Alju09g1454 482 Gene3D - 256 338 - -
Alju09g1454 482 SMART serkin_6 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1454 482 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 258 314 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1454 Alju-ChrAlju09 38579685 38581551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1454 1 393 MAP Kinase Kinase Kinase AT5G41990 54.293 4.22e-132 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Alju09g1454 Pkinase 1.2e-35 CL0016