Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1453 ATGTCTACTTTCTTGCGGAATCGAAATTCTTTCGTGGATTTTGGATGCCGATTCCACTTTTGTTCGACGTTCGATTCCTATTCAGTTGCTTGTGAGGCGTTTTCTGAACAGCAGACTGCACATTTTGGTTTTTTAAAATCCGTGATAGTTATGGATTCCGGCGCCTGTTTGTCTGCTGGCAAGTTTGAGAACGATGATGCTGATGTTGTGGAGAAGGATCCTACCGGACGTTACATTCGGTATGATGATATGTTGGGCAGAGGAGCATTCAAGACTGTATATAAGGCGTTTGATGAAGATGATGGGATGGAAGTCGCCTGGAGCAAAGAGGATATTGTGCACGTTTTGCAGTCTCCAGTTAAATTGGAAATGTTGTATTCTGAGATCCATCTCCTAAAGTCATTGGAACATGAAAAAATCCTCAAGTGCTATAATTCTTGGGTTGACGATAAAACCAAGACTATCAACATGATAACTGAGTTATTTGTCTCTGGGAGTTTGAGGCGATATCGAAGAATGCATAAGAATGTTGAATTGAAGGCCATCAAGAACTGGGCAAGGCAAATTCTTCAAGGTTTATGCTATTTGCACAGCCACAATCCTCCTATCATCCACAGAGATTTGAAATGTGATAATATTTTCATTAATGGTAATACTGGAGAAGTTAAGATTGGAGATCTTGGATTGGCAGCTGTCCTACAGCAACCTACTGCACACACTGTTATTGGGACACCAGAATTCATGGCTCCTGAGCTTTATGATGAAGAGTACAATGAACTTGTTGACGTATATTCTTTTGGCATGTGCATGTTAGAAATGATAACCTGTGAGTACCCATACAGCGAATGCAAAAATCACGCACAGATATATAAGAAAGTTACCAATGGAATAAAGCCTGCTGCTCTTGGTAAAGTGAGCAATCCCCAAGTGAGGCAATTCATAGAGAAATGTTTAGTTCCAGCATCCATGAGATTGCCCGCATCTGAGCTATTGAAGGATCCATTTCTTGCTACTGACGACATGAAGGAGGTCAACCATGAAGTGCAGTTGCCCATTCACACGACACCGCCAACAACTGAGTTATGTCCTATGGAGATAAAGCGAACTGTCAAGGATGTTTTGCCTGTCTCCTGTTTGAAAGTTAATGAAGAAACTCCTCAAATATTATCTCTGGATCTCCCTTGGAAAAATGAGGGTACTGAATTCAGGCTACGAGGGGAGAAAAATGCTTCAAACAGGATAATTTTACTAACTCTGCGCATTGCTAAGGCAAAAGGTTCTGCGCAGAAAATCGAGTTTCCATTCTATCTTGATTCTGATACAGCAATTTCAATTGCTGAGGAGATGGTAGAAAGTCTGAATCTCTCTACTGAGGAAGCAAGTGTTATTGCTGAACTGATACACACCATGATTGTCAGGCTTGTTCCTGATTGGGGAGGGTCATGTCAGCAATTATCATTTGGAGCAGATTGTTTGGATGGCAATTCTCATGTTGTTGTAAATGGGGGATCACCTAATGTTGAGGATCTTGTCAACTCTCAGGTTCTTGAGGAAGATCAAGAGAAACATGAATCATTCACATTGGGTATATTTGCAGAGGATGATATTACAGTCACCTCAGATGCTAAATCTGATAATACTCTCTTTGATGGAGTCTCTGAGGGTTCTATTACCAAAAAGTCCAATTCAGACTTCTGGTTTTCTGATCAAGATGAAGGCAATATGGAAGCTGATGGTGGTGAATCTGATAGCTCAGCGAACTCAACTATCTCATTTGTAGATTCATGTGGGTATGAGCCCATGAAATTTGACCGCTCATGCATCAACTATCTTTCTCTCGCTGACAAAGATCAATGTGACCAACTGCCACCTGATCTTGAAGCAATAAATACACAGTACCAACAATGCTTTCTTGAATTTGCCAAGATGAGGCAGGATGCAATAGAAAACCCACAAAGGGGATGGATTACTAGGAAGAAAATACTAGTAATATGA 1995 0.4085 MSTFLRNRNSFVDFGCRFHFCSTFDSYSVACEAFSEQQTAHFGFLKSVIVMDSGACLSAGKFENDDADVVEKDPTGRYIRYDDMLGRGAFKTVYKAFDEDDGMEVAWSKEDIVHVLQSPVKLEMLYSEIHLLKSLEHEKILKCYNSWVDDKTKTINMITELFVSGSLRRYRRMHKNVELKAIKNWARQILQGLCYLHSHNPPIIHRDLKCDNIFINGNTGEVKIGDLGLAAVLQQPTAHTVIGTPEFMAPELYDEEYNELVDVYSFGMCMLEMITCEYPYSECKNHAQIYKKVTNGIKPAALGKVSNPQVRQFIEKCLVPASMRLPASELLKDPFLATDDMKEVNHEVQLPIHTTPPTTELCPMEIKRTVKDVLPVSCLKVNEETPQILSLDLPWKNEGTEFRLRGEKNASNRIILLTLRIAKAKGSAQKIEFPFYLDSDTAISIAEEMVESLNLSTEEASVIAELIHTMIVRLVPDWGGSCQQLSFGADCLDGNSHVVVNGGSPNVEDLVNSQVLEEDQEKHESFTLGIFAEDDITVTSDAKSDNTLFDGVSEGSITKKSNSDFWFSDQDEGNMEADGGESDSSANSTISFVDSCGYEPMKFDRSCINYLSLADKDQCDQLPPDLEAINTQYQQCFLEFAKMRQDAIENPQRGWITRKKILVI 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1453 664 Gene3D Phosphorylase Kinase; domain 1 63 160 - -
Alju09g1453 664 Gene3D Transferase(Phosphotransferase) domain 1 162 344 - -
Alju09g1453 664 SMART serkin_6 79 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1453 664 Gene3D - 414 479 - -
Alju09g1453 664 FunFam Probable serine/threonine-protein kinase WNK1 64 160 - -
Alju09g1453 664 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 417 471 IPR024678 GO:0004674|GO:0005524
Alju09g1453 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Alju09g1453 664 ProSiteProfiles Protein kinase domain profile. 79 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1453 664 Pfam Protein kinase domain 83 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1453 664 CDD STKc_WNK 77 336 - -
Alju09g1453 664 SUPERFAMILY Protein kinase-like (PK-like) 81 373 IPR011009 -
Alju09g1453 664 FunFam probable serine/threonine-protein kinase WNK9 162 341 - -
Alju09g1453 664 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 63 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1453 Alju-ChrAlju09 38561173 38564204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1453 51 663 MAP Kinase Kinase Kinase AT5G41990 50.081 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Alju09g1453 Pkinase 4.5e-50 CL0016