Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1427 ATGAAAGGGCGCTCGCACCGCCTGCAGAGTTCGGACCCTCCCGACGACTGGATTGATGGTTCTTGGACTGTGGATTGCGTATGTGGTGTGAATTTTGACGATGGGGAGGAGATGGTGAATTGTGACGAGTGCGGTGTGTGGGTGCACACGCGTTGCTCGCGATATGTTAAAGGAGATGATATGTTTGTATGCGATAAGTGCAAGAGTAAGATTAATCGATCTGATACTGAGGAAACGGAGGTGGCCCAATTGTTAGCTGAACTCCCTACGAAGACCGTGAGAATGGAGAATTCGTTTGCACCCATCGGAGCTCCTCGACGTCCTTTCTTGCCTATGGAGGAGAGGGTGCACATTCAAGGAATTCCTGGAGGCGATCCTTCCCTTTTTGGTGGGCTATCCTCTATTTTTAATCGGCAGTTATGGAAATGCACTGGGTATGTTCCCAAACAGTTTAATTTTCAGTATAGGGAATTTCCCTGCTGGGATGAGAATTCCACTAGGGAGGAGGATAATGAGAATCCTATTAATAAAGGGGCTGGAGTTCTATTTTCCTTGTCAAAGGAGAGTATATCGGCCACCCCTATTGCAACTTTAGTTGACATGAGAGCTAGGGATGGAGAAGATGGTTCTGACCTGAAGAAGTCTCTGAAAGCGATGAAAAAGTGTGACAGTGTAGAGGCAGAAGCTATTAGGCGTGCCCAGAATGGCATGAAGAAGGAGAGAAGTTTGCTTCGGTCTGTTATGCATTCAGGTAAGCAGAAAAAAGAAGAGTTAGGGACATCCAAAGATCGCAGTGGGAAGAAGAGGATTAAAACTTCAGACAAAGAGGCAGATCCCAAGAGGAGAAATTCACATACTTCGAAAACAGCTTTTACACCCACCAGTGATGCAAAACAATTGGAATTTTATGAAGACAGAGGTCTGAAGAATTTCAAGACTGATACGTGGAGCGTAAAGAATAAAACTTTGAAAGACATTGTGGTTCAGGAACACGTTTCAAATAATTACTTTGTTGTGGATACCATTATGGAGGAGCCAAATATCAACTCAGCCACTACTGAGGATTCTTCAGAAGCCTTATATCCTGACACGGCAAGACATAGTTTTTCAGTTGGACGAGAAATAGCGGCAGAGAAAATTGAAAATAAGGCTCCTTCTGTTTCTGAAATTTCTTCCAAGACTGATGATAACATTTCACCATATTTGAAGAATAATTCTGCTGGAAATGCTTCAATTAAAGAAGAGGAGGGAGATGGCCTGGCAGTTAATAATGCAGAAGACATTATAGTAGTAAGAAACACAGTAAGTCCTGCAGAAGCAGATCTTTGTGGTCCTGCTCCTCCAGAACTCAAGGACAACCAGGATTCCCAAGATTTTGACTATGAAACGTGTCCTAGCTCTGGACAGAGCAATCTTAAGGTGAAGAGAGAAGGGGATAACGATAATTTTGGAAAGCGTCTGATTTCTCATTCTTCTAGCATGAATGATCTGAAAAGTGACGAGGAACTGCCTAAACACAAATCTGATCATGTTAATGACAGTGTGGTGACCAATTCATCCTATGAAAATAAGGTGGAAGACAGTGACAGGAAATTAGAAGTAATCATTGATTGTCATACCAATAATTCTGAGGCATTATCATGTCATTTTTGTCCTGTAAAACAAGAAATAGCAGGGTCTGAAGGTCCAATGGAAACCCAGAAGGGTGTTTCAGAAATAGAAGATGGTTCTGGCTATGCTGAGGATCCATCAAAATCTGAAACTACATTGTGTCCTCATAAAGGTTCCTCAACTATGAATTCCAAGATTCCTGCCAATGACCAAAAATCTGTGATTCCTAATCCTCTTGTCAAGCATGGAGCAATGAAAGATTGCAACATGTACAATAAGAAAGAAAGCAATCAAAATGATATTGTGAGGGACGAAGTTTCTAGGAAGTCTCAAAAAGAACGCCTGAAATCATCTTCAAATCCTAATCCGAAAGCAATGCATTCAAGCAAAAGTGCACAAAATGCTGTTTTAAGGCAAGTCAGTGCAGATTCAAAAGATTTTGTTAATAGTTCATCTTCTACAGCATCTTTGGTTCATCCTACCGGAACTAATTTAGGCTTGAGCAAGTCTGATGAATCATTACTACACCAGAAGTCGTTACCAGTGCCAAATAAGATTTCCTCGTTGGCTCCACAGAGAGGTGAAAAGATTAATCAGACAAACCTCCAACCTTCCTCGAAGGTGAACCAGAATCACGTGCCATCACCTTCACCAATATCTAATTCTTCTGCAATGCTAAGTGATGAGGAGCTTGCACTACTATTGCATCAAGAACTAAATAGCTCTCCCCGAGTTCCTCGTGTGCCCCGAGCACGTCATGGGGGTAGCTTGCCACAGCTAACTTCTCCCAGTGGTGCTAGCATGCTATCAAAGCGCACATCATCTGCTGGAGGAAAGGATTATTGTTTGTTTTCTAGGAGAAAATACAAGGATGCATCTAGAGATGGGCTTTGCAGTTCCCGTGAGCTTGAAGATGAATCTAAAAGGATAGAAAATACATCATCATCCTCTGATCAGAAGAAAAAAGATATGGAATGTGTGGAAGAAGATGCTTCTGTAATGGAAGAACGTCACACTTCTATGACAACCATAAATTCTACAACAAAGAATGTTGCTCCTGCCTCTGCTGCCACTGCAAATAGTAGTTCAGCCTCCCCTCCTGAGGATCAAAACTTGTCATTTACACGCAACTCACCAAAAAATATATCTGATGATGATAATGGAACTGCTGGAAGATCAGCCCATCGCACTTTGCCTGGCTTGATCAATGAGATTATGAGCAAGGGTCTTCGGATAACATATGATGAACTCTGTAATGCTGTGCTGCCACACTGGAATAACTTGAGGAAGCATAATGGAGACCGCTATGCTTACACAAGCCACTCTCAAGCTGTTCTTGATTGTTTGAGGAACCGGCATGAATGGGCAAGGTTGGTTGATCGTGGTCCAAAGACAAATTCTACTAGAAAGAGGCGAAAGTTTGATGAAGAATCTGATGATAATGTAAGTAGCAAGGGCAGAACTGCCAAAGGAGGTGAAGGGAAGAATTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCACGGAAGCGCAGGCGTCTTGTTCTTCAGGGGATAGCAGTCAAGGATGCCCGGAGAAGAAAGACTGATTCGCTAACTGATGAAGATGTTGGTGCATTCTCCAATTCTAGTGAGGAGAGTGAATTTAGCGAGGATGAGATTCAGGGTGGCAGAACGGGTCAAGTGGGAAGTGAATCTTCTGCTAGTTCAGATGAGGAAGGCAGCGCCTAA 3351 0.4273 MKGRSHRLQSSDPPDDWIDGSWTVDCVCGVNFDDGEEMVNCDECGVWVHTRCSRYVKGDDMFVCDKCKSKINRSDTEETEVAQLLAELPTKTVRMENSFAPIGAPRRPFLPMEERVHIQGIPGGDPSLFGGLSSIFNRQLWKCTGYVPKQFNFQYREFPCWDENSTREEDNENPINKGAGVLFSLSKESISATPIATLVDMRARDGEDGSDLKKSLKAMKKCDSVEAEAIRRAQNGMKKERSLLRSVMHSGKQKKEELGTSKDRSGKKRIKTSDKEADPKRRNSHTSKTAFTPTSDAKQLEFYEDRGLKNFKTDTWSVKNKTLKDIVVQEHVSNNYFVVDTIMEEPNINSATTEDSSEALYPDTARHSFSVGREIAAEKIENKAPSVSEISSKTDDNISPYLKNNSAGNASIKEEEGDGLAVNNAEDIIVVRNTVSPAEADLCGPAPPELKDNQDSQDFDYETCPSSGQSNLKVKREGDNDNFGKRLISHSSSMNDLKSDEELPKHKSDHVNDSVVTNSSYENKVEDSDRKLEVIIDCHTNNSEALSCHFCPVKQEIAGSEGPMETQKGVSEIEDGSGYAEDPSKSETTLCPHKGSSTMNSKIPANDQKSVIPNPLVKHGAMKDCNMYNKKESNQNDIVRDEVSRKSQKERLKSSSNPNPKAMHSSKSAQNAVLRQVSADSKDFVNSSSSTASLVHPTGTNLGLSKSDESLLHQKSLPVPNKISSLAPQRGEKINQTNLQPSSKVNQNHVPSPSPISNSSAMLSDEELALLLHQELNSSPRVPRVPRARHGGSLPQLTSPSGASMLSKRTSSAGGKDYCLFSRRKYKDASRDGLCSSRELEDESKRIENTSSSSDQKKKDMECVEEDASVMEERHTSMTTINSTTKNVAPASAATANSSSASPPEDQNLSFTRNSPKNISDDDNGTAGRSAHRTLPGLINEIMSKGLRITYDELCNAVLPHWNNLRKHNGDRYAYTSHSQAVLDCLRNRHEWARLVDRGPKTNSTRKRRKFDEESDDNVSSKGRTAKGGEGKNFELQKEEFPKGKRKARKRRRLVLQGIAVKDARRRKTDSLTDEDVGAFSNSSEESEFSEDEIQGGRTGQVGSESSASSDEEGSA 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1427 1116 MobiDBLite consensus disorder prediction 874 925 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 997 1116 - -
Alju09g1427 1116 SMART PHD_3 25 68 IPR001965 -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 779 814 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 459 473 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 794 811 - -
Alju09g1427 1116 SUPERFAMILY FYVE/PHD zinc finger 14 72 IPR011011 -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 634 652 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 440 513 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 737 760 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 997 1043 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 653 698 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 495 512 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 1097 1116 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 232 285 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 1056 1074 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 830 932 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 830 873 - -
Alju09g1427 1116 ProSitePatterns Zinc finger PHD-type signature. 26 67 IPR019786 -
Alju09g1427 1116 PANTHER UNCHARACTERIZED 1 1106 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 561 698 - -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 232 293 - -
Alju09g1427 1116 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 75 IPR013083 -
Alju09g1427 1116 MobiDBLite consensus disorder prediction 589 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1427 Alju-ChrAlju09 38343206 38348539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1427 24 67 PHD Transcription Factor Family AT5G22260 42.553 5.82e-06 48.5