Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1425 ATGAATGCATTTTATGTTAGATATTTTATAAAGAGAATCGGAGTCATTACATTGCATCGTTTCATCAGAATATGTCAACAAGAAAAAGAAGAAAGTTTGATAGAACTTGGATGTCAATGTCGGGGTGGACTAGCAAAAGCACATCAAACATGTGTAGAAACCTGGTTTCGCACAAGAGGATCAAACACATGTGAGATCTGCCAGCAAGTAGCTCAGAATGTGTCACCTCCTGAATCCCAGCCAAATACTGATTACTGGGTATGGAGGATTGACCCGACAATGAGGACACAGGATCGTGGAAGGGGATGTTTTAGTCCTCTCTGGGTTGCATTTTCAATTCTCATCGGTGGTCTCTTGTTGGATGTGCTCATATCCATCACATTTGGTGTCTCTGCACTACCTGTAAACATAATAATTGGTGTTATCATTGTTCTAGGACTTGGCACTGCACTTCGGCTGGCCCTAGAATTCTGCCATGAGTGGGGTTTGAGGAGAGCTGTACAGAGGGTGGAAACCAATGTGAGTCATGGGTACCACCCTGCTGTGTAA 549 0.4335 MNAFYVRYFIKRIGVITLHRFIRICQQEKEESLIELGCQCRGGLAKAHQTCVETWFRTRGSNTCEICQQVAQNVSPPESQPNTDYWVWRIDPTMRTQDRGRGCFSPLWVAFSILIGGLLLDVLISITFGVSALPVNIIIGVIIVLGLGTALRLALEFCHEWGLRRAVQRVETNVSHGYHPAV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1425 182 SMART ringv_2 23 68 IPR011016 GO:0008270
Alju09g1425 182 Pfam RING-variant domain 23 67 IPR011016 GO:0008270
Alju09g1425 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 72 IPR013083 -
Alju09g1425 182 PANTHER ZINC FINGER, RING-CH-TYPE 20 138 - -
Alju09g1425 182 ProSiteProfiles Zinc finger RING-CH-type profile. 14 74 IPR011016 GO:0008270
Alju09g1425 182 SUPERFAMILY RING/U-box 20 71 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1425 23 74 C3H Transcription Factor Family AT2G37950 56.364 2.42e-13 63.9