Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1398 ATGGAAACCAACTTTCCAAGTCAAAGCAGCACAATTGGAATAAAAGGAACCGTCGGCTATGCTCCTCCAGAGTATGGAACAGGAGATGAAGTTTCAACACAAGGTGACGTCTATAGCTTTGGGATTCTTTTGTTGGAAATGCTCACTGGAAAAAGACCCACTGATGAAATATTCACAGATGGTATTAATCTCCATAAATATGTCAAGATCGCCTTGCCAGATAAACTGTTACAAATTGTGGACCCTCCCCTTCTCCACAGAGAACTAAAACAAAAAGCTTCACCGGCAGAAGAAGAAGAAGAAAACAGGAATGATCAGCTCAGTGAGATTCACATGGAGAAATGTCTGCTCGAACTTTTTCATATTGGACTTGCTTGTTCAGCTGAATCACCCAGAGAAAGAATGAATATGAGGGATGTCACTAAGGAACTTGACCTAATAAAAAGTTCTTTCCTTGCTGCTAGAAGAATGGAGACTGGTGCTAATAGTGTCACAGTGCAGATCAATCAAGCTTGA 516 0.4089 METNFPSQSSTIGIKGTVGYAPPEYGTGDEVSTQGDVYSFGILLLEMLTGKRPTDEIFTDGINLHKYVKIALPDKLLQIVDPPLLHRELKQKASPAEEEEENRNDQLSEIHMEKCLLELFHIGLACSAESPRERMNMRDVTKELDLIKSSFLAARRMETGANSVTVQINQA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1398 171 Gene3D Transferase(Phosphotransferase) domain 1 2 167 - -
Alju09g1398 171 ProSiteProfiles Protein kinase domain profile. 1 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1398 171 SUPERFAMILY Protein kinase-like (PK-like) 10 150 IPR011009 -
Alju09g1398 171 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 9 149 - -
Alju09g1398 171 Pfam Protein tyrosine and serine/threonine kinase 15 144 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1398 Alju-ChrAlju09 37862255 37863771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1398 4 156 Receptor kinase-like Gene Family AT3G47580 43.791 3.38e-37 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Alju09g1398 PK_Tyr_Ser-Thr 2.9e-07 CL0016