Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1388 ATGAAGCAGCCATCTAAGTCGAGGCCATGGAGGCCACTCACGGCGAATTGCTGCTCAACGGAGGTCCAAACCAAGCTCGGAAACTTCAGTCGATGCAAGCCGACTTCACGGTCGGATTTGTCCAAGGACGTTGCTCCGGTGGCGTCGTTCCGGAGGCTGTCGTTCTCGGATCTGAGCCGGTCGTCGTCGATGCGAATCAACGAGGATCTGGCGCAGTCGTTCGGGTCGGAACTACACGATTTTCAGCTGAGCGAATTGAGAGCCATAACGCAGAATTTCTCGAGCAATTTCTTGTTGGGAGAAGGAGGGTTCGGGACTGTGCATAAGGGCTACATCGATGATAACTTCCGGCAAGGGTTGAAGGCTCAGCCCGTCGCCGTTAAGCTTCTGGACATTGAAGGCTTGCAAGGACACCGTGAATGGCTTGCAGAAGTAGTATTTCTTGGACAGCTAAGGCACCCAAACTTGGTGAAGTTGATAGGATATTGTTGTGAAGAAGAAGAACGGCTCCTTGTGTACGAGTTCATGCCAAGAGGAAGCTTGGAGAATCACTTGTTCAGAAGGATATCATCACTGCCTTGGGCAACAAGATTGAAAATTGCAATAGGTGCTGCTAAAGGCCTTTCCTTTTTGCATGGCGCAGAGAATCCAGTCATTTACAGGGACTTCAAAACTTCCAATGTCTTGCTTGATTCTGATTTCACAGCAAAGTTGTCAGATTTTGGATTAGCCAAAATGGGGCCAGAGGGATCTAAATCTCATGTCACAACCAGAGTCATGGGTACTTATGGATATGCAGCCCCTGAATACATCTCTACGGGTCACTTAACCACGAAAAGCGATGTCTATAGCTTTGGGGTAGTCCTGCTAGAACTACTCACAGGAAGGAGAGCAATGGAGAAGACAAGGCCAAAGACAGAGCAGAGCCTTGTGGATTGGTCAAGACCTTATTTGAGCAGTTCTAGAAAGTTAAGGTATATTATGGATCCAAGACTTGCAGGGCAATACTCTGTGAAGGGTTCAAAGGAGATGGCTCGTTTGGCACAGCAATGCATAAGTCTGAATCCTAAAGACAGGCCAAGGATGGCAACCATTGTTGAAACTCTTGAAAACTTGCAGCAGTACAAGGACATGGCTATTACCTGTGGACACTGGCCTGCTTCAGCAAAATCTAGAAATGGAGCTTCTGATAATAAGATCAAAATTGATATCAGAGTTGGCGCTAACCCCAGGAAGCCCTCTCCTTTAGTTGCAAGCAAAAAAACTTGA 1269 0.4744 MKQPSKSRPWRPLTANCCSTEVQTKLGNFSRCKPTSRSDLSKDVAPVASFRRLSFSDLSRSSSMRINEDLAQSFGSELHDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYIDDNFRQGLKAQPVAVKLLDIEGLQGHREWLAEVVFLGQLRHPNLVKLIGYCCEEEERLLVYEFMPRGSLENHLFRRISSLPWATRLKIAIGAAKGLSFLHGAENPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSKSHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRAMEKTRPKTEQSLVDWSRPYLSSSRKLRYIMDPRLAGQYSVKGSKEMARLAQQCISLNPKDRPRMATIVETLENLQQYKDMAITCGHWPASAKSRNGASDNKIKIDIRVGANPRKPSPLVASKKT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1388 422 FunFam Serine/threonine-protein kinase PBS1 176 383 - -
Alju09g1388 422 Pfam Protein tyrosine and serine/threonine kinase 99 369 IPR001245 GO:0004672|GO:0006468
Alju09g1388 422 CDD STKc_IRAK 99 372 - -
Alju09g1388 422 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Alju09g1388 422 SUPERFAMILY Protein kinase-like (PK-like) 74 371 IPR011009 -
Alju09g1388 422 ProSiteProfiles Protein kinase domain profile. 93 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g1388 422 PANTHER OS01G0588500 PROTEIN-RELATED 60 373 - -
Alju09g1388 422 Gene3D Phosphorylase Kinase; domain 1 55 175 - -
Alju09g1388 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Alju09g1388 422 Gene3D Transferase(Phosphotransferase) domain 1 176 384 - -
Alju09g1388 422 FunFam Serine/threonine-protein kinase BIK1 59 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1388 Alju-ChrAlju09 37759807 37762695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1388 81 385 Glycoside Hydrolase AT3G07070 50.809 9.25e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju09g1388 PK_Tyr_Ser-Thr 1e-48 CL0016